RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TP53INP2Q8IXH6 220 aa9.23□□□□□ -0.93
CLK1-212ENST00000482590 GALNT12Q8IXK2 581 aa9.23□□□□□ -0.93
CLK1-212ENST00000482590 LRRC59Q96AG4 307 aaKnown RBP9.23□□□□□ -0.93
CLK1-212ENST00000482590 LIN7BQ9HAP6 207 aa9.23□□□□□ -0.93
CLK1-212ENST00000482590 PNPLA6Q8IY17 1366 aa9.23□□□□□ -0.93
CLK1-212ENST00000482590 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 UNCXA6NJT0 531 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 ECEL1O95672 775 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 RAB6AP20340 208 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 TRIM56Q9BRZ2 755 aaKnown RBP9.22□□□□□ -0.93
CLK1-212ENST00000482590 SEMA6CQ9H3T2 930 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 ACSS3Q9H6R3 686 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 FAM105AQ9NUU6 356 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 AFF2P51816 1311 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
CLK1-212ENST00000482590 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.22□□□□□ -0.93
CLK1-212ENST00000482590 MAP7Q14244 749 aa9.21□□□□□ -0.94
CLK1-212ENST00000482590 AKAP4Q5JQC9 854 aa9.21□□□□□ -0.94
CLK1-212ENST00000482590 DYMQ7RTS9 669 aa9.21□□□□□ -0.94
CLK1-212ENST00000482590 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
CLK1-212ENST00000482590 ROBO2Q9HCK4 1378 aa9.21□□□□□ -0.94
CLK1-212ENST00000482590 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
CLK1-212ENST00000482590 SND1Q7KZF4 910 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLK1-212ENST00000482590 ZNF765Q7L2R6 523 aa9.2□□□□□ -0.94
CLK1-212ENST00000482590 POLR3GLQ9BT43 218 aa9.2□□□□□ -0.94
CLK1-212ENST00000482590 LRRC4CQ9HCJ2 640 aa9.2□□□□□ -0.94
CLK1-212ENST00000482590 ZC3H7BQ9UGR2 993 aaKnown RBP9.2□□□□□ -0.94
CLK1-212ENST00000482590 RGS12O14924 1447 aa9.2□□□□□ -0.94
CLK1-212ENST00000482590 ABCA3Q99758 1704 aa9.19□□□□□ -0.94
CLK1-212ENST00000482590 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.19□□□□□ -0.94
CLK1-212ENST00000482590 B3GALT4O96024 378 aa9.19□□□□□ -0.94
CLK1-212ENST00000482590 ITGB5P18084 799 aa9.19□□□□□ -0.94
CLK1-212ENST00000482590 HP1BP3Q5SSJ5 553 aaPredicted RBP9.19□□□□□ -0.94
CLK1-212ENST00000482590 USPL1Q5W0Q7 1092 aa9.19□□□□□ -0.94
CLK1-212ENST00000482590 OGFOD2Q6N063 350 aa9.19□□□□□ -0.94
CLK1-212ENST00000482590 SEZ6L2Q6UXD5 910 aa9.19□□□□□ -0.94
CLK1-212ENST00000482590 DHX37Q8IY37 1157 aaKnown RBP9.19□□□□□ -0.94
CLK1-212ENST00000482590 DDX17Q92841 729 aaKnown RBP9.19□□□□□ -0.94
CLK1-212ENST00000482590 C8orf37Q96NL8 207 aa9.19□□□□□ -0.94
CLK1-212ENST00000482590 GSX1Q9H4S2 264 aaPredicted RBP9.19□□□□□ -0.94
CLK1-212ENST00000482590 PAK6Q9NQU5 681 aaPredicted RBP9.19□□□□□ -0.94
CLK1-212ENST00000482590 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
CLK1-212ENST00000482590 PPM1GO15355 546 aaPredicted RBP9.18□□□□□ -0.94
CLK1-212ENST00000482590 CYP27A1Q02318 531 aa9.18□□□□□ -0.94
CLK1-212ENST00000482590 FZD5Q13467 585 aa9.18□□□□□ -0.94
CLK1-212ENST00000482590 PLCH1Q4KWH8 1693 aa9.18□□□□□ -0.94
CLK1-212ENST00000482590 FLCNQ8NFG4 579 aa9.18□□□□□ -0.94
CLK1-212ENST00000482590 C1GALT1Q9NS00 363 aa9.18□□□□□ -0.94
CLK1-212ENST00000482590 AP4E1Q9UPM8 1137 aa9.18□□□□□ -0.94
CLK1-212ENST00000482590 TECPR2O15040 1411 aa9.17□□□□□ -0.94
CLK1-212ENST00000482590 ANKRD30BQ9BXX2 1392 aa9.17□□□□□ -0.94
CLK1-212ENST00000482590 DYNC1LI2O43237 492 aaPredicted RBP9.17□□□□□ -0.94
CLK1-212ENST00000482590 KIAA0319Q5VV43 1072 aa9.17□□□□□ -0.94
CLK1-212ENST00000482590 CORO1BQ9BR76 489 aa9.17□□□□□ -0.94
CLK1-212ENST00000482590 ZNF576Q9H609 170 aa9.17□□□□□ -0.94
CLK1-212ENST00000482590 ZFYVE1Q9HBF4 777 aa9.17□□□□□ -0.94
CLK1-212ENST00000482590 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 PXDNQ92626 1479 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 PIK3C2GO75747 1445 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 SPATA31E1Q6ZUB1 1445 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 NPHP3Q7Z494 1330 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 RBM47A0AV96 593 aaKnown RBP9.16□□□□□ -0.94
CLK1-212ENST00000482590 ASPAP45381 313 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 RBM6P78332 1123 aaKnown RBP9.16□□□□□ -0.94
CLK1-212ENST00000482590 AGBL5Q8NDL9 886 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 ASIC4Q96FT7 647 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 ORAI2Q96SN7 254 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 BRWD3Q6RI45 1802 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 ITSN1Q15811 1721 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 NWD2Q9ULI1 1742 aa9.16□□□□□ -0.94
CLK1-212ENST00000482590 MYOM2P54296 1465 aa9.15□□□□□ -0.94
CLK1-212ENST00000482590 AOC2O75106 756 aa9.15□□□□□ -0.94
CLK1-212ENST00000482590 ITPKAP23677 461 aa9.15□□□□□ -0.94
CLK1-212ENST00000482590 ECM1Q16610 540 aa9.15□□□□□ -0.94
CLK1-212ENST00000482590 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
CLK1-212ENST00000482590 LRPPRCP42704 1394 aaKnown RBP9.14□□□□□ -0.95
CLK1-212ENST00000482590 ADGRF5Q8IZF2 1346 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 ICMTO60725 284 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 JUNBP17275 347 aaPredicted RBP9.14□□□□□ -0.95
CLK1-212ENST00000482590 RGL3Q3MIN7 710 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
CLK1-212ENST00000482590 WDR18Q9BV38 432 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 LGR6Q9HBX8 967 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 EGFL7Q9UHF1 273 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 BRPF3Q9ULD4 1205 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 PPP1R9AQ9ULJ8 1098 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 DAGLAQ9Y4D2 1042 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 ADGRB2O60241 1585 aa9.14□□□□□ -0.95
CLK1-212ENST00000482590 YTHDC2Q9H6S0 1430 aaKnown RBP9.14□□□□□ -0.95
CLK1-212ENST00000482590 OGFOD3Q6PK18 319 aa9.13□□□□□ -0.95
CLK1-212ENST00000482590 BCL7CQ8WUZ0 217 aaPredicted RBP9.13□□□□□ -0.95
CLK1-212ENST00000482590 EHD4Q9H223 541 aa9.13□□□□□ -0.95
CLK1-212ENST00000482590 STK26Q9P289 416 aa9.13□□□□□ -0.95
CLK1-212ENST00000482590 ARID1BQ8NFD5 2236 aaPredicted RBP9.13□□□□□ -0.95
CLK1-212ENST00000482590 ATRNO75882 1429 aa9.13□□□□□ -0.95
CLK1-212ENST00000482590 ARHGEF28Q8N1W1 1705 aaKnown RBP9.12□□□□□ -0.95
CLK1-212ENST00000482590 ORC1Q13415 861 aa9.12□□□□□ -0.95
CLK1-212ENST00000482590 WFDC3Q8IUB2 231 aa9.12□□□□□ -0.95
CLK1-212ENST00000482590 POU5F2Q8N7G0 328 aa9.12□□□□□ -0.95
CLK1-212ENST00000482590 MPHOSPH9Q99550 1183 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms