RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, human

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-208	ENST00000482582	PTPRF	P10586	1907 aa		13.96	□□□□□ -0.18
TRAIP-208	ENST00000482582	UNCX	A6NJT0	531 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582		B4E1Z4	1266 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	MPHOSPH10	O00566	681 aa	Known RBP	13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	TFAP4	Q01664	338 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	ADCK5	Q3MIX3	580 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	SIAH1	Q8IUQ4	282 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	CCDC17	Q96LX7	622 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	BACH2	Q9BYV9	841 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	TOMM22	Q9NS69	142 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	SNX14	Q9Y5W7	946 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	MYH4	Q9Y623	1939 aa		13.95	□□□□□ -0.18
TRAIP-208	ENST00000482582	IGKV6D-41	A0A0C4DH26	115 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	GPR25	O00155	361 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	EPB41L2	O43491	1005 aa	Known RBP	13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	RANBP6	O60518	1105 aa	Known RBP	13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	NMT2	O60551	498 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	KDM4A	O75164	1064 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	ASNS	P08243	561 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	TM4SF4	P48230	202 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	TSGA10IP	Q3SY00	556 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	CYB5R4	Q7L1T6	521 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	NEDD1	Q8NHV4	660 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	OPTN	Q96CV9	577 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	RNF41	Q9H4P4	317 aa	Predicted RBP	13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	ZNF287	Q9HBT7	754 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	PICK1	Q9NRD5	415 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	IL17RB	Q9NRM6	502 aa		13.94	□□□□□ -0.18
TRAIP-208	ENST00000482582	SPDYE5	A6NIY4	337 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	PC	P11498	1178 aa	Known RBP	13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	RAB3GAP1	Q15042	981 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	SPRYD7	Q5W111	196 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	TMEM179	Q6ZVK1	233 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	ERO1B	Q86YB8	467 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	ACER1	Q8TDN7	264 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	OTUD5	Q96G74	571 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	WNK4	Q96J92	1243 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	CABP5	Q9NP86	173 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	ZSWIM5	Q9P217	1185 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	ZHX2	Q9Y6X8	837 aa		13.93	□□□□□ -0.18
TRAIP-208	ENST00000482582	HTT	P42858	3142 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582		A0A1W2PRG0	241 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	TSPY2	A6NKD2	308 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	USP17L5	A8MUK1	530 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	IRF6	O14896	467 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	TSPY3	P0CV98	308 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	TSPY8	P0CW00	308 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	ANTXR2	P58335	489 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	RNF20	Q5VTR2	975 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	ESR2	Q92731	530 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	CEP95	Q96GE4	821 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	ZKSCAN3	Q9BRR0	538 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	KRT23	Q9C075	422 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	GINM1	Q9NU53	330 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	AFG3L2	Q9Y4W6	797 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	PLIN4	Q96Q06	1357 aa		13.92	□□□□□ -0.18
TRAIP-208	ENST00000482582	MKI67	P46013	3256 aa	Known RBP	13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	CPA1	P15085	419 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	ZKSCAN1	P17029	563 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	PPAT	Q06203	517 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	SPP2	Q13103	211 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	PPIL2	Q13356	520 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	CHST3	Q7LGC8	479 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	NCOA7	Q8NI08	942 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	WDR18	Q9BV38	432 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	CNNM2	Q9H8M5	875 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	MTMR4	Q9NYA4	1195 aa		13.91	□□□□□ -0.18
TRAIP-208	ENST00000482582	TRIM75P	A6NK02	468 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	EEF2	P13639	858 aa	Known RBP	13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	ICA1	Q05084	483 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	TRDN	Q13061	729 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	RCSD1	Q6JBY9	416 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	ZNF280C	Q8ND82	737 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	MS4A4A	Q96JQ5	239 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	KANSL2	Q9H9L4	492 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	GPHN	Q9NQX3	736 aa	Predicted RBP	13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	TCP11L1	Q9NUJ3	509 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	KCNH4	Q9UQ05	1017 aa		13.9	□□□□□ -0.18
TRAIP-208	ENST00000482582	POTEF	A5A3E0	1075 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	EIF5B	O60841	1220 aa	Known RBP	13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	MCC	P23508	829 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	NOV	P48745	357 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	ATP2B2	Q01814	1243 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	MOGS	Q13724	837 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	KIAA1755	Q5JYT7	1200 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	RALYL	Q86SE5	291 aa	Known RBP	13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	TCEANC2	Q96MN5	208 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	JAKMIP1	Q96N16	626 aa	Known RBP	13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	NEK1	Q96PY6	1258 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	SENP2	Q9HC62	589 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	NYAP2	Q9P242	653 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	CLIP2	Q9UDT6	1046 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	CENPF	P49454	3210 aa		13.89	□□□□□ -0.19
TRAIP-208	ENST00000482582	CXCL11	O14625	94 aa		13.88	□□□□□ -0.19
TRAIP-208	ENST00000482582	ZBTB48	P10074	688 aa	Predicted RBP	13.88	□□□□□ -0.19
TRAIP-208	ENST00000482582	EXOSC10	Q01780	885 aa	Known RBP	13.88	□□□□□ -0.19
TRAIP-208	ENST00000482582	MTMR2	Q13614	643 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms