RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 NBPF4Q96M43 638 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 TGIF2Q9GZN2 237 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 SEPT3Q9UH03 358 aa9.36□□□□□ -0.91
SNX13-208ENST00000482558 AOX1Q06278 1338 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 NPHP3Q7Z494 1330 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 REC8O95072 547 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 NOS2P35228 1153 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 EIF4A1P60842 406 aaKnown RBP9.35□□□□□ -0.91
SNX13-208ENST00000482558 ATP8B2P98198 1209 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 SFSWAPQ12872 951 aaKnown RBP9.35□□□□□ -0.91
SNX13-208ENST00000482558 KRT24Q2M2I5 525 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 ZNF530Q6P9A1 599 aaPredicted RBP9.35□□□□□ -0.91
SNX13-208ENST00000482558 SLC4A10Q6U841 1118 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 TXNRD3Q86VQ6 643 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 ANKRD24Q8TF21 1146 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 MEIS3Q99687 375 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 C2orf49Q9BVC5 232 aaPredicted RBP9.35□□□□□ -0.91
SNX13-208ENST00000482558 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 MIS18AQ9NYP9 233 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 ZNF232Q9UNY5 417 aa9.35□□□□□ -0.91
SNX13-208ENST00000482558 BTBD11A6QL63 1104 aa9.34□□□□□ -0.91
SNX13-208ENST00000482558 HSP90AB1P08238 724 aaKnown RBP9.34□□□□□ -0.91
SNX13-208ENST00000482558 NAA30Q147X3 362 aaPredicted RBP9.34□□□□□ -0.91
SNX13-208ENST00000482558 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
SNX13-208ENST00000482558 CAPN12Q6ZSI9 719 aa9.34□□□□□ -0.91
SNX13-208ENST00000482558 METTL16Q86W50 562 aaKnown RBP9.34□□□□□ -0.91
SNX13-208ENST00000482558 GTF3C2Q8WUA4 911 aaPredicted RBP9.34□□□□□ -0.91
SNX13-208ENST00000482558 LENG1Q96BZ8 264 aaPredicted RBP9.34□□□□□ -0.91
SNX13-208ENST00000482558 ORAI2Q96SN7 254 aa9.34□□□□□ -0.91
SNX13-208ENST00000482558 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
SNX13-208ENST00000482558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.34□□□□□ -0.91
SNX13-208ENST00000482558 DBF4Q9UBU7 674 aaPredicted RBP9.34□□□□□ -0.91
SNX13-208ENST00000482558 KDM3BQ7LBC6 1761 aa9.34□□□□□ -0.91
SNX13-208ENST00000482558 ALS2Q96Q42 1657 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 SERTM1A2A2V5 107 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 RNMTO43148 476 aaKnown RBP9.33□□□□□ -0.92
SNX13-208ENST00000482558 HYAL3O43820 417 aaPredicted RBP9.33□□□□□ -0.92
SNX13-208ENST00000482558 LILRB5O75023 590 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 ALDH1L1O75891 902 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 UBTFL1P0CB47 393 aaPredicted RBP9.33□□□□□ -0.92
SNX13-208ENST00000482558 SELPP16109 830 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 KCNQ4P56696 695 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 RABEP1Q15276 862 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 RGL4Q8IZJ4 473 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 NLGN1Q8N2Q7 840 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 RAPGEF4Q8WZA2 1011 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 LRRCC1Q9C099 1032 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 PIF1Q9H611 641 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 ANTXR1Q9H6X2 564 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 METTL5Q9NRN9 209 aaKnown RBP9.33□□□□□ -0.92
SNX13-208ENST00000482558 HYPKQ9NX55 129 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 SPG7Q9UQ90 795 aa9.33□□□□□ -0.92
SNX13-208ENST00000482558 DDX58O95786 925 aaKnown RBP9.32□□□□□ -0.92
SNX13-208ENST00000482558 RNF187Q5TA31 235 aaPredicted RBP9.32□□□□□ -0.92
SNX13-208ENST00000482558 G2E3Q7L622 706 aa9.32□□□□□ -0.92
SNX13-208ENST00000482558 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
SNX13-208ENST00000482558 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
SNX13-208ENST00000482558 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
SNX13-208ENST00000482558 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
SNX13-208ENST00000482558 A0A0A0MRY4 1105 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 PARNO95453 639 aaKnown RBP9.31□□□□□ -0.92
SNX13-208ENST00000482558 HIRAP54198 1017 aaPredicted RBP9.31□□□□□ -0.92
SNX13-208ENST00000482558 RAC1P63000 192 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 LDLRAD1Q5T700 205 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 SSH3Q8TE77 659 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 DNAAF4Q8WXU2 420 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 RNF34Q969K3 372 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 NGLY1Q96IV0 654 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 GMLQ99445 158 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 STAP2Q9UGK3 403 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 CPDO75976 1380 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 TMEM94Q12767 1356 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
SNX13-208ENST00000482558 F6X3S4 739 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 ERC2O15083 957 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 MCCP23508 829 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 PDE1AP54750 535 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 FGD1P98174 961 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 RBL2Q08999 1139 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 SF3B2Q13435 895 aaKnown RBP9.3□□□□□ -0.92
SNX13-208ENST00000482558 MTMR3Q13615 1198 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 TCEAL1Q15170 157 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 C1orf53Q5VUE5 145 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 ERC1Q8IUD2 1116 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 USHBP1Q8N6Y0 703 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 USP44Q9H0E7 712 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 ANKIB1Q9P2G1 1089 aa9.3□□□□□ -0.92
SNX13-208ENST00000482558 GSPT1P15170 499 aaKnown RBP9.29□□□□□ -0.92
SNX13-208ENST00000482558 MCM2P49736 904 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 MTX1Q13505 466 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 SH3PXD2AQ5TCZ1 1133 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 KSR2Q6VAB6 950 aa9.29□□□□□ -0.92
SNX13-208ENST00000482558 KRTAP19-1Q8IUB9 90 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms