RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 DRD2P14416 443 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 GRK4P32298 578 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 ASPAP45381 313 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 ETF1P62495 437 aaKnown RBP5.46□□□□□ -1.54
VPS41-212ENST00000482217 CLCQ05315 142 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 LRRFIP1Q32MZ4 808 aaKnown RBP5.46□□□□□ -1.54
VPS41-212ENST00000482217 TMEM201Q5SNT2 666 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 GK5Q6ZS86 529 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 RBBP8NLQ8NC74 664 aaPredicted RBP5.46□□□□□ -1.54
VPS41-212ENST00000482217 OR6P1Q8NGX9 317 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 ZNF507Q8TCN5 953 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 CPLX3Q8WVH0 158 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 KCNF1Q9H3M0 494 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 PIDD1Q9HB75 910 aa5.46□□□□□ -1.54
VPS41-212ENST00000482217 MAGEC2Q9UBF1 373 aaPredicted RBP5.46□□□□□ -1.54
VPS41-212ENST00000482217 GRIN3BO60391 1043 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 PLCG1P19174 1290 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 MAP4P27816 1152 aaKnown RBP5.45□□□□□ -1.54
VPS41-212ENST00000482217 TTLL4Q14679 1199 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 CPSF6Q16630 551 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS41-212ENST00000482217 ZFYVE27Q5T4F4 411 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 HID1Q8IV36 788 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 GIMAP7Q8NHV1 300 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 CRBNQ96SW2 442 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 FAM105AQ9NUU6 356 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 REV1Q9UBZ9 1251 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 PPT2Q9UMR5 302 aa5.45□□□□□ -1.54
VPS41-212ENST00000482217 HMX2A2RU54 273 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 MEIS3P2A8K0S8 358 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 SH3BP5O60239 455 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 STK10O94804 968 aaKnown RBP5.44□□□□□ -1.54
VPS41-212ENST00000482217 PGRP06401 933 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 NTF4P34130 210 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 CAP2P40123 477 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 GIPRP48546 466 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 USP11P51784 963 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 EIF6P56537 245 aaKnown RBP5.44□□□□□ -1.54
VPS41-212ENST00000482217 RBL2Q08999 1139 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 LONRF3Q496Y0 759 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 SLC6A19Q695T7 634 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 CLEC4GQ6UXB4 293 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 CDC37L1Q7L3B6 337 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 SMYD4Q8IYR2 804 aaPredicted RBP5.44□□□□□ -1.54
VPS41-212ENST00000482217 ISL2Q96A47 359 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 SHDQ96IW2 340 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 MTA3Q9BTC8 594 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 MAF1Q9H063 256 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 ACSS3Q9H6R3 686 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 GMIPQ9P107 970 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 PCOLCE2Q9UKZ9 415 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 CORINQ9Y5Q5 1042 aa5.44□□□□□ -1.54
VPS41-212ENST00000482217 FAM95CA0A1B0GW59 222 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 RNGTTO60942 597 aaKnown RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 NEFMP07197 916 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 HCLS1P14317 486 aaPredicted RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.549e-7■■■■□ 24.5
VPS41-212ENST00000482217 GRIK1P39086 918 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 YARSP54577 528 aaKnown RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 RBM10P98175 930 aaKnown RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 SGO2Q562F6 1265 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 SOGA3Q5TF21 947 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 FBXW10Q5XX13 1052 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 INTS5Q6P9B9 1019 aaKnown RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 PAOXQ6QHF9 649 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 ZDHHC13Q8IUH4 622 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 MCATQ8IVS2 390 aaKnown RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 MRPL41Q8IXM3 137 aaKnown RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 TMEM40Q8WWA1 233 aa5.43□□□□□ -1.54
VPS41-212ENST00000482217 EZH1Q92800 747 aaPredicted RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 SECISBP2LQ93073 1101 aaKnown RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 ACSF2Q96CM8 615 aaPredicted RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 G3BP2Q9UN86 482 aaKnown RBP5.43□□□□□ -1.54
VPS41-212ENST00000482217 SLC22A31A6NKX4 558 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 HYAL3O43820 417 aaPredicted RBP5.42□□□□□ -1.54
VPS41-212ENST00000482217 COBLO75128 1261 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 RXRBP28702 533 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 CD97P48960 835 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 MAP7Q14244 749 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 PLEKHG6Q3KR16 790 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 TNNI3KQ59H18 835 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 CDCP2Q5VXM1 449 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 CDPF1Q6NVV7 123 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 CCDC81Q6ZN84 652 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 KRBA2Q6ZNG9 492 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 NBPF11Q86T75 865 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 JAZF1Q86VZ6 243 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS41-212ENST00000482217 RPUSD2Q8IZ73 545 aaKnown RBP5.42□□□□□ -1.54
VPS41-212ENST00000482217 TAB3Q8N5C8 712 aaPredicted RBP5.42□□□□□ -1.54
VPS41-212ENST00000482217 TMEM87BQ96K49 555 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 TM9SF2Q99805 663 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 METTL22Q9BUU2 404 aaPredicted RBP5.42□□□□□ -1.54
VPS41-212ENST00000482217 ZNF408Q9H9D4 720 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 SSU72Q9NP77 194 aaKnown RBP5.42□□□□□ -1.54
VPS41-212ENST00000482217 TJP2Q9UDY2 1190 aa5.42□□□□□ -1.54
VPS41-212ENST00000482217 EIF3JO75822 258 aaKnown RBP5.41□□□□□ -1.54
VPS41-212ENST00000482217 RAB6AP20340 208 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 NBPF6Q5VWK0 638 aa5.41□□□□□ -1.54
VPS41-212ENST00000482217 INTS3Q68E01 1043 aaKnown RBP5.41□□□□□ -1.54
VPS41-212ENST00000482217 OVOS1Q6IE37 1185 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms