RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 NT5C2P49902 561 aa13.64□□□□□ -0.23
HPS4-212ENST00000481910 FKBP1BP68106 108 aa13.64□□□□□ -0.23
HPS4-212ENST00000481910 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
HPS4-212ENST00000481910 MAP3K11Q16584 847 aa13.64□□□□□ -0.23
HPS4-212ENST00000481910 CHST3Q7LGC8 479 aa13.64□□□□□ -0.23
HPS4-212ENST00000481910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
HPS4-212ENST00000481910 UBE2Q2LH0YL09 131 aa13.63□□□□□ -0.23
HPS4-212ENST00000481910 GH2P01242 217 aa13.63□□□□□ -0.23
HPS4-212ENST00000481910 MCM5P33992 734 aa13.63□□□□□ -0.23
HPS4-212ENST00000481910 SHROOM1Q2M3G4 852 aaPredicted RBP13.63□□□□□ -0.23
HPS4-212ENST00000481910 BLOC1S2Q6QNY1 142 aa13.63□□□□□ -0.23
HPS4-212ENST00000481910 IQCA1Q86XH1 822 aa13.63□□□□□ -0.23
HPS4-212ENST00000481910 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
HPS4-212ENST00000481910 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
HPS4-212ENST00000481910 NEDD1Q8NHV4 660 aa13.63□□□□□ -0.23
HPS4-212ENST00000481910 CSADQ9Y600 493 aa13.63□□□□□ -0.23
HPS4-212ENST00000481910 HSP90AA1P07900 732 aaKnown RBP13.62□□□□□ -0.23
HPS4-212ENST00000481910 ASNSP08243 561 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 CPA1P15085 419 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 JAG1P78504 1218 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
HPS4-212ENST00000481910 COL9A3Q14050 684 aaPredicted RBP13.62□□□□□ -0.23
HPS4-212ENST00000481910 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.62□□□□□ -0.23
HPS4-212ENST00000481910 TMEM179Q6ZVK1 233 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 CYB5R4Q7L1T6 521 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 DHX32Q7L7V1 743 aaKnown RBP13.62□□□□□ -0.23
HPS4-212ENST00000481910 SCYL3Q8IZE3 742 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 UPF3BQ9BZI7 483 aaKnown RBP13.62□□□□□ -0.23
HPS4-212ENST00000481910 TM6SF1Q9BZW5 370 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 CYP46A1Q9Y6A2 500 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 NMT2O60551 498 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 VGLL4Q14135 290 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 SEPT2Q15019 361 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 RUFY3Q7L099 469 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 IL17RAQ96F46 866 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 KIF2CQ99661 725 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 PLCD4Q9BRC7 762 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 UBAC1Q9BSL1 405 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 PICK1Q9NRD5 415 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 ZBTB21Q9ULJ3 1066 aa13.62□□□□□ -0.23
HPS4-212ENST00000481910 PAPPA2Q9BXP8 1791 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 PRC1O43663 620 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 ANTXR2P58335 489 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 LDLRAD1Q5T700 205 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 TCEANC2Q96MN5 208 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 ZSCAN10Q96SZ4 725 aaPredicted RBP13.61□□□□□ -0.23
HPS4-212ENST00000481910 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.61□□□□□ -0.23
HPS4-212ENST00000481910 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 IL17RBQ9NRM6 502 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 GINM1Q9NU53 330 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 ATAD5Q96QE3 1844 aa13.61□□□□□ -0.23
HPS4-212ENST00000481910 ERICH2A1L162 156 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 RPS6KB1P23443 525 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 GUCY1A2P33402 732 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 SART3Q15020 963 aaKnown RBP13.6□□□□□ -0.23
HPS4-212ENST00000481910 NOL9Q5SY16 702 aaKnown RBP13.6□□□□□ -0.23
HPS4-212ENST00000481910 CEP95Q96GE4 821 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 CLMNQ96JQ2 1002 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 TCP11L1Q9NUJ3 509 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.6□□□□□ -0.23
HPS4-212ENST00000481910 UNCXA6NJT0 531 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 TMEM88BA6NKF7 163 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 IFIT3O14879 490 aaKnown RBP13.6□□□□□ -0.23
HPS4-212ENST00000481910 PTPRAP18433 802 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 NEK4P51957 841 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 EXOSC10Q01780 885 aaKnown RBP13.6□□□□□ -0.23
HPS4-212ENST00000481910 CLEC10AQ8IUN9 316 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 SLC10A4Q96EP9 437 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 ELP3Q9H9T3 547 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 MTMR4Q9NYA4 1195 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 STX8Q9UNK0 236 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 DOCK1Q14185 1865 aa13.6□□□□□ -0.23
HPS4-212ENST00000481910 TNKSO95271 1327 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 OTOFQ9HC10 1997 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 PLIN4Q96Q06 1357 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 USP17L5A8MUK1 530 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 HUNKP57058 714 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 ATP2B2Q01814 1243 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 ICA1Q05084 483 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 CCDC178Q5BJE1 867 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
HPS4-212ENST00000481910 ZNF592Q92610 1267 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 TMEM87BQ96K49 555 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 MTA3Q9BTC8 594 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 PDRG1Q9NUG6 133 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 SNCAIPQ9Y6H5 919 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 WDR19Q8NEZ3 1342 aa13.59□□□□□ -0.23
HPS4-212ENST00000481910 IGKV6D-41A0A0C4DH26 115 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 TTLL1O95922 423 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 RABEP1Q15276 862 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 TMEM67Q5HYA8 995 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 SAPCD2Q86UD0 394 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 DGKHQ86XP1 1220 aa13.58□□□□□ -0.23
HPS4-212ENST00000481910 ENAHQ8N8S7 591 aaPredicted RBP13.58□□□□□ -0.23
HPS4-212ENST00000481910 IGDCC4Q8TDY8 1250 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms