RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 GH2P01242 217 aa21.29■■□□□ 1
RXRB-203ENST00000481441 USP17L24Q0WX57 530 aa21.29■■□□□ 1
RXRB-203ENST00000481441 SAP30BPQ9UHR5 308 aaKnown RBP21.29■■□□□ 1
RXRB-203ENST00000481441 DNAH12Q6ZR08 3092 aa21.29■■□□□ 1
RXRB-203ENST00000481441 IGHA2P01877 340 aa21.29■■□□□ 1
RXRB-203ENST00000481441 HLA-DOAP06340 250 aa21.29■■□□□ 1
RXRB-203ENST00000481441 RTP1P59025 263 aa21.29■■□□□ 1
RXRB-203ENST00000481441 TRPV1Q8NER1 839 aa21.29■■□□□ 1
RXRB-203ENST00000481441 NPLOC4Q8TAT6 608 aa21.29■■□□□ 1
RXRB-203ENST00000481441 CDX2Q99626 313 aaPredicted RBP21.29■■□□□ 1
RXRB-203ENST00000481441 PRKAG2Q9UGJ0 569 aa21.29■■□□□ 1
RXRB-203ENST00000481441 LAMA2P24043 3122 aaKnown RBP21.28■■□□□ 1
RXRB-203ENST00000481441 PNMA6EA0A0J9YXQ4 647 aa21.28■■□□□ 1
RXRB-203ENST00000481441 CYP2E1P05181 493 aaPredicted RBP21.28■■□□□ 1
RXRB-203ENST00000481441 CNGA1P29973 690 aa21.28■■□□□ 1
RXRB-203ENST00000481441 CYP2C19P33261 490 aa21.28■■□□□ 1
RXRB-203ENST00000481441 ATP2B2Q01814 1243 aa21.28■■□□□ 1
RXRB-203ENST00000481441 G3BP1Q13283 466 aaKnown RBP eCLIP21.28■■□□□ 18e-8■■■■■ 29.2
RXRB-203ENST00000481441 GRB14Q14449 540 aa21.28■■□□□ 1
RXRB-203ENST00000481441 ZYXQ15942 572 aaKnown RBP21.28■■□□□ 1
RXRB-203ENST00000481441 WDR78Q5VTH9 848 aa21.28■■□□□ 1
RXRB-203ENST00000481441 ATF7IPQ6VMQ6 1270 aa21.28■■□□□ 1
RXRB-203ENST00000481441 LBX2Q6XYB7 198 aa21.28■■□□□ 1
RXRB-203ENST00000481441 CATSPERGQ6ZRH7 1159 aa21.28■■□□□ 1
RXRB-203ENST00000481441 ARHGAP45Q92619 1136 aa21.28■■□□□ 1
RXRB-203ENST00000481441 BTBD7Q9P203 1132 aa21.28■■□□□ 1
RXRB-203ENST00000481441 VCANP13611 3396 aa21.27■□□□□ 0.99
RXRB-203ENST00000481441 SHHQ15465 462 aa21.27■□□□□ 0.99
RXRB-203ENST00000481441 TATDN1Q6P1N9 297 aa21.27■□□□□ 0.99
RXRB-203ENST00000481441 FEZ1Q99689 392 aa21.27■□□□□ 0.99
RXRB-203ENST00000481441 SEMA6BQ9H3T3 888 aa21.27■□□□□ 0.99
RXRB-203ENST00000481441 IGSF3O75054 1194 aa21.26■□□□□ 0.99
RXRB-203ENST00000481441 CYBAP13498 195 aa21.26■□□□□ 0.99
RXRB-203ENST00000481441 VCAM1P19320 739 aa21.26■□□□□ 0.99
RXRB-203ENST00000481441 DYNLL1P63167 89 aaKnown RBP21.26■□□□□ 0.99
RXRB-203ENST00000481441 TTC39AQ5SRH9 613 aa21.26■□□□□ 0.99
RXRB-203ENST00000481441 C9orf50Q5SZB4 431 aa21.26■□□□□ 0.99
RXRB-203ENST00000481441 KIAA1683Q9H0B3 1180 aa21.26■□□□□ 0.99
RXRB-203ENST00000481441 ATP11BQ9Y2G3 1177 aa21.26■□□□□ 0.99
RXRB-203ENST00000481441 IVNS1ABPQ9Y6Y0 642 aa21.26■□□□□ 0.99
RXRB-203ENST00000481441 ZNF236Q9UL36 1845 aa21.25■□□□□ 0.99
RXRB-203ENST00000481441 USP14P54578 494 aa21.25■□□□□ 0.99
RXRB-203ENST00000481441 GJC2Q5T442 439 aaPredicted RBP21.25■□□□□ 0.99
RXRB-203ENST00000481441 MAFAQ8NHW3 353 aaPredicted RBP21.25■□□□□ 0.99
RXRB-203ENST00000481441 DBNDD2Q9BQY9 259 aa21.25■□□□□ 0.99
RXRB-203ENST00000481441 GPR108Q9NPR9 543 aa21.25■□□□□ 0.99
RXRB-203ENST00000481441 PIH1D3Q9NQM4 214 aaKnown RBP21.25■□□□□ 0.99
RXRB-203ENST00000481441 SPDYE16A6NNV3 312 aaPredicted RBP21.24■□□□□ 0.99
RXRB-203ENST00000481441 GNAI2P04899 355 aa21.24■□□□□ 0.99
RXRB-203ENST00000481441 RARSP54136 660 aaKnown RBP21.24■□□□□ 0.99
RXRB-203ENST00000481441 TNNI3KQ59H18 835 aa21.24■□□□□ 0.99
RXRB-203ENST00000481441 CCDC158Q5M9N0 1113 aa21.24■□□□□ 0.99
RXRB-203ENST00000481441 SLC39A5Q6ZMH5 540 aa21.24■□□□□ 0.99
RXRB-203ENST00000481441 ACER1Q8TDN7 264 aa21.24■□□□□ 0.99
RXRB-203ENST00000481441 FPGT-TNNI3KV9GXZ4 949 aa21.24■□□□□ 0.99
RXRB-203ENST00000481441 EYSQ5T1H1 3165 aa21.23■□□□□ 0.99
RXRB-203ENST00000481441 ZAP70P43403 619 aa21.23■□□□□ 0.99
RXRB-203ENST00000481441 SNX17Q15036 470 aa21.23■□□□□ 0.99
RXRB-203ENST00000481441 RAB3GAP1Q15042 981 aa21.23■□□□□ 0.99
RXRB-203ENST00000481441 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
RXRB-203ENST00000481441 ARRDC4Q8NCT1 418 aa21.23■□□□□ 0.99
RXRB-203ENST00000481441 ZNF512BQ96KM6 892 aaPredicted RBP21.23■□□□□ 0.99
RXRB-203ENST00000481441 EHD4Q9H223 541 aa21.23■□□□□ 0.99
RXRB-203ENST00000481441 TTYH1Q9H313 450 aaPredicted RBP21.23■□□□□ 0.99
RXRB-203ENST00000481441 SERPINB13Q9UIV8 391 aa21.23■□□□□ 0.99
RXRB-203ENST00000481441 CYP7A1P22680 504 aa21.22■□□□□ 0.99
RXRB-203ENST00000481441 SMAD3P84022 425 aaKnown RBP21.22■□□□□ 0.99
RXRB-203ENST00000481441 OLFML2BQ68BL8 750 aa21.22■□□□□ 0.99
RXRB-203ENST00000481441 TTC28Q96AY4 2481 aa21.22■□□□□ 0.99
RXRB-203ENST00000481441 ABCB5Q2M3G0 1257 aa21.21■□□□□ 0.99
RXRB-203ENST00000481441 CERKLQ49MI3 558 aaPredicted RBP21.21■□□□□ 0.99
RXRB-203ENST00000481441 MYLIPQ8WY64 445 aa21.21■□□□□ 0.99
RXRB-203ENST00000481441 BADQ92934 168 aa21.21■□□□□ 0.99
RXRB-203ENST00000481441 RPAP3Q9H6T3 665 aaPredicted RBP21.21■□□□□ 0.99
RXRB-203ENST00000481441 PRDM5Q9NQX1 630 aaPredicted RBP21.21■□□□□ 0.99
RXRB-203ENST00000481441 A0A0G2JMZ2 1700 aa21.2■□□□□ 0.98
RXRB-203ENST00000481441 SPTBN5Q9NRC6 3674 aaKnown RBP21.2■□□□□ 0.98
RXRB-203ENST00000481441 KBTBD13C9JR72 458 aa21.2■□□□□ 0.98
RXRB-203ENST00000481441 TRIM60Q495X7 471 aa21.2■□□□□ 0.98
RXRB-203ENST00000481441 DPP9Q86TI2 863 aa21.2■□□□□ 0.98
RXRB-203ENST00000481441 MIGA1Q8NAN2 632 aa21.2■□□□□ 0.98
RXRB-203ENST00000481441 MOV10L1Q9BXT6 1211 aaKnown RBP21.2■□□□□ 0.98
RXRB-203ENST00000481441 PRDM6Q9NQX0 595 aa21.2■□□□□ 0.98
RXRB-203ENST00000481441 PDLIM7Q9NR12 457 aa21.2■□□□□ 0.98
RXRB-203ENST00000481441 SEPT4O43236 478 aa21.19■□□□□ 0.98
RXRB-203ENST00000481441 ADORA2AP29274 412 aa21.19■□□□□ 0.98
RXRB-203ENST00000481441 ANO1Q5XXA6 986 aa21.19■□□□□ 0.98
RXRB-203ENST00000481441 SH3RF1Q7Z6J0 888 aa21.19■□□□□ 0.98
RXRB-203ENST00000481441 TRIM43BA6NCK2 446 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 STRNO43815 780 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 TRIM27P14373 513 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 GUCY1A2P33402 732 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 SHMT1P34896 483 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 USP5P45974 858 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 POLA2Q14181 598 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 C1orf53Q5VUE5 145 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 TTC6Q86TZ1 520 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 CERS3Q8IU89 383 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 TRIM43Q96BQ3 446 aaPredicted RBP21.18■□□□□ 0.98
RXRB-203ENST00000481441 CABP5Q9NP86 173 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 256.5 ms