RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 MCF2L2Q86YR7 1114 aa21.82■■□□□ 1.08
CCM2-214ENST00000481194 CCDC150Q8NCX0 1101 aa21.82■■□□□ 1.08
CCM2-214ENST00000481194 SMCO2A6NFE2 343 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 SPON1Q9HCB6 807 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 MYSM1Q5VVJ2 828 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 SH3RF3Q8TEJ3 882 aaPredicted RBP21.81■■□□□ 1.08
CCM2-214ENST00000481194 VWA3AA6NCI4 1184 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 FILIP1Q7Z7B0 1213 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 SYCP3Q8IZU3 236 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 TRIM47Q96LD4 638 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 VPS54Q9P1Q0 977 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 ZYXQ15942 572 aaKnown RBP21.81■■□□□ 1.08
CCM2-214ENST00000481194 FBXO33Q7Z6M2 555 aa21.81■■□□□ 1.08
CCM2-214ENST00000481194 MRC1P22897 1456 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 POTEJP0CG39 1038 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 IRX3P78415 501 aaPredicted RBP21.8■■□□□ 1.08
CCM2-214ENST00000481194 STRIP1Q5VSL9 837 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 GOLGA6L1Q8N7Z2 621 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 AOC3Q16853 763 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 SV2BQ7L1I2 683 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 MTMR6Q9Y217 621 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 CDK8P49336 464 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 EZH2Q15910 746 aaKnown RBP21.8■■□□□ 1.08
CCM2-214ENST00000481194 EAPPQ56P03 285 aaPredicted RBP21.8■■□□□ 1.08
CCM2-214ENST00000481194 NOM1Q5C9Z4 860 aaKnown RBP21.8■■□□□ 1.08
CCM2-214ENST00000481194 LRRC47Q8N1G4 583 aaKnown RBP21.8■■□□□ 1.08
CCM2-214ENST00000481194 JAKMIP3Q5VZ66 844 aa21.8■■□□□ 1.08
CCM2-214ENST00000481194 CLRN2A0PK11 232 aa21.79■■□□□ 1.08
CCM2-214ENST00000481194 ADD1P35611 737 aaKnown RBP21.79■■□□□ 1.08
CCM2-214ENST00000481194 ANO6Q4KMQ2 910 aa21.79■■□□□ 1.08
CCM2-214ENST00000481194 KIF2AO00139 706 aaPredicted RBP21.79■■□□□ 1.08
CCM2-214ENST00000481194 VPS36Q86VN1 386 aa21.79■■□□□ 1.08
CCM2-214ENST00000481194 KCNH3Q9ULD8 1083 aa21.79■■□□□ 1.08
CCM2-214ENST00000481194 KCNJ14Q9UNX9 436 aa21.79■■□□□ 1.08
CCM2-214ENST00000481194 TRAPPC10P48553 1259 aa21.79■■□□□ 1.08
CCM2-214ENST00000481194 FBXO11Q86XK2 927 aa21.79■■□□□ 1.08
CCM2-214ENST00000481194 FOSP01100 380 aaPredicted RBP21.78■■□□□ 1.08
CCM2-214ENST00000481194 IFNAR1P17181 557 aa21.78■■□□□ 1.08
CCM2-214ENST00000481194 TYRO3Q06418 890 aa21.78■■□□□ 1.08
CCM2-214ENST00000481194 NSUN7Q8NE18 718 aaKnown RBP21.78■■□□□ 1.08
CCM2-214ENST00000481194 FOXP1Q9H334 677 aaPredicted RBP21.78■■□□□ 1.08
CCM2-214ENST00000481194 CLSTN2Q9H4D0 955 aa21.78■■□□□ 1.08
CCM2-214ENST00000481194 ZSWIM5Q9P217 1185 aa21.78■■□□□ 1.08
CCM2-214ENST00000481194 TMEM179Q6ZVK1 233 aa21.78■■□□□ 1.08
CCM2-214ENST00000481194 CASP7P55210 303 aa21.78■■□□□ 1.08
CCM2-214ENST00000481194 CACNA2D4Q7Z3S7 1137 aa21.78■■□□□ 1.08
CCM2-214ENST00000481194 COL23A1Q86Y22 540 aaPredicted RBP21.78■■□□□ 1.08
CCM2-214ENST00000481194 ZSCAN12O43309 604 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 GPS2Q13227 327 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 OTUD7BQ6GQQ9 843 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 KIFC2Q96AC6 838 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 DCP1AQ9NPI6 582 aaPredicted RBP21.77■■□□□ 1.08
CCM2-214ENST00000481194 FBXO18Q8NFZ0 1043 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 KAZALD1Q96I82 304 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 FAM13AO94988 1023 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 CALCRLQ16602 461 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 FCHSD1Q86WN1 690 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 CCDC65Q8IXS2 484 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 NSUN4Q96CB9 384 aaKnown RBP21.77■■□□□ 1.08
CCM2-214ENST00000481194 PSTPIP2Q9H939 334 aa21.77■■□□□ 1.08
CCM2-214ENST00000481194 PRPF3O43395 683 aaKnown RBP21.76■■□□□ 1.07
CCM2-214ENST00000481194 AHDC1Q5TGY3 1603 aaPredicted RBP21.76■■□□□ 1.07
CCM2-214ENST00000481194 PRKCSHP14314 528 aaPredicted RBP21.76■■□□□ 1.07
CCM2-214ENST00000481194 FRMPD2Q68DX3 1309 aaPredicted RBP21.76■■□□□ 1.07
CCM2-214ENST00000481194 CCT6AP40227 531 aaKnown RBP21.76■■□□□ 1.07
CCM2-214ENST00000481194 CAGE1Q8TC20 777 aa21.76■■□□□ 1.07
CCM2-214ENST00000481194 ARGLU1Q9NWB6 273 aaPredicted RBP21.76■■□□□ 1.07
CCM2-214ENST00000481194 IVNS1ABPQ9Y6Y0 642 aa21.76■■□□□ 1.07
CCM2-214ENST00000481194 ORC4O43929 436 aa21.76■■□□□ 1.07
CCM2-214ENST00000481194 SNAP23O00161 211 aa21.76■■□□□ 1.07
CCM2-214ENST00000481194 RDXP35241 583 aaKnown RBP21.76■■□□□ 1.07
CCM2-214ENST00000481194 SCARF1Q14162 830 aa21.76■■□□□ 1.07
CCM2-214ENST00000481194 CCDC174Q6PII3 467 aa21.76■■□□□ 1.07
CCM2-214ENST00000481194 ZNF408Q9H9D4 720 aa21.76■■□□□ 1.07
CCM2-214ENST00000481194 AMNQ9BXJ7 453 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 GCOM1H8Y6P7 765 aaPredicted RBP21.75■■□□□ 1.07
CCM2-214ENST00000481194 LAD1O00515 517 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 POLR2MP0CAP2 368 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 DESP17661 470 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 SMIM5Q71RC9 77 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 APOBEC3FQ8IUX4 373 aaKnown RBP21.75■■□□□ 1.07
CCM2-214ENST00000481194 ZNRF3Q9ULT6 936 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.75■■□□□ 1.07
CCM2-214ENST00000481194 USH1GQ495M9 461 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 ADALQ6DHV7 355 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 FAM160B2Q86V87 743 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 DCAF4Q8WV16 495 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 STK36Q9NRP7 1315 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 KDM3AQ9Y4C1 1321 aa21.75■■□□□ 1.07
CCM2-214ENST00000481194 CHRNA5P30532 468 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 SPA17Q15506 151 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 NLRX1Q86UT6 975 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 GSG1L2A8MUP6 293 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 MMP14P50281 582 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 MB21D2Q8IYB1 491 aaPredicted RBP21.74■■□□□ 1.07
CCM2-214ENST00000481194 TDRD7Q8NHU6 1098 aaKnown RBP21.74■■□□□ 1.07
CCM2-214ENST00000481194 PDS5AQ29RF7 1337 aaKnown RBP21.74■■□□□ 1.07
CCM2-214ENST00000481194 TMEM232C9JQI7 657 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 HHIPL2Q6UWX4 724 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 TBC1D10CQ8IV04 446 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms