RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 GRIK5Q16478 980 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 CLEC4GQ6UXB4 293 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 WFDC8Q8IUA0 241 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 TRPM4Q8TD43 1214 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 RTF1Q92541 710 aaKnown RBP8.59□□□□□ -1.03
LRCH3-216ENST00000481048 VTI1AQ96AJ9 217 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 IFT43Q96FT9 208 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 BRIP1Q9BX63 1249 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 NMRK2Q9NPI5 230 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 FER1L6Q2WGJ9 1857 aa8.59□□□□□ -1.03
LRCH3-216ENST00000481048 ANKRD31Q8N7Z5 1873 aa8.58□□□□□ -1.04
LRCH3-216ENST00000481048 BTBD11A6QL63 1104 aa8.58□□□□□ -1.04
LRCH3-216ENST00000481048 LMNB1P20700 586 aa8.58□□□□□ -1.04
LRCH3-216ENST00000481048 PRKAR2BP31323 418 aa8.58□□□□□ -1.04
LRCH3-216ENST00000481048 IREB2P48200 963 aaKnown RBP8.58□□□□□ -1.04
LRCH3-216ENST00000481048 LRP8Q14114 963 aa8.58□□□□□ -1.04
LRCH3-216ENST00000481048 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
LRCH3-216ENST00000481048 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
LRCH3-216ENST00000481048 GLTPD2A6NH11 291 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 A1BGP04217 495 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 GPLD1P80108 840 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 C11orf91Q3C1V1 193 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 TBC1D9BQ66K14 1250 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 HFE2Q6ZVN8 426 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 C2CD5Q86YS7 1000 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 DNAJC5GQ8N7S2 189 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 PHACTR3Q96KR7 559 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 C11orf16Q9NQ32 467 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 CARMIL3Q8ND23 1372 aa8.57□□□□□ -1.04
LRCH3-216ENST00000481048 SCN7AQ01118 1682 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 HYAL3O43820 417 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-216ENST00000481048 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
LRCH3-216ENST00000481048 U2AF1L5P0DN76 240 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-216ENST00000481048 VEGFAP15692 232 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-216ENST00000481048 ARID4AP29374 1257 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-216ENST00000481048 WEE1P30291 646 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 U2AF1Q01081 240 aaKnown RBP eCLIP8.56□□□□□ -1.044e-8■■■□□ 15.4
LRCH3-216ENST00000481048 SOGA3Q5TF21 947 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 SMC1BQ8NDV3 1235 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 TTC9Q92623 222 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
LRCH3-216ENST00000481048 ZNF652Q9Y2D9 606 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 USP16Q9Y5T5 823 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 DLG5Q8TDM6 1919 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 ARFGEF2Q9Y6D5 1785 aa8.56□□□□□ -1.04
LRCH3-216ENST00000481048 WDR90Q96KV7 1748 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 SLX4Q8IY92 1834 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 KRTAP9-6A0A140TA67 174 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 CAMTA2O94983 1202 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 NEFMP07197 916 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 NOS3P29474 1203 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 PPP2R1AP30153 589 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 ST5P78524 1137 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 STYK1Q6J9G0 422 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 PRR5LQ6MZQ0 368 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 IGF2-ASQ6U949 168 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 ZNF622Q969S3 477 aaKnown RBP eCLIP8.55□□□□□ -1.04
LRCH3-216ENST00000481048 PNNQ9H307 717 aaKnown RBP8.55□□□□□ -1.04
LRCH3-216ENST00000481048 USP20Q9Y2K6 914 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 BCORQ6W2J9 1755 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 CACNA1SQ13698 1873 aa8.55□□□□□ -1.04
LRCH3-216ENST00000481048 LTBP3Q9NS15 1303 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 NFKBIEO00221 500 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 OPLAHO14841 1288 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 NPHP1O15259 732 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 EIF2AK2P19525 551 aaKnown RBP8.54□□□□□ -1.04
LRCH3-216ENST00000481048 CNGB1Q14028 1251 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-216ENST00000481048 TAF7Q15545 349 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-216ENST00000481048 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 CNBD1Q8NA66 436 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 PNISRQ8TF01 805 aaKnown RBP8.54□□□□□ -1.04
LRCH3-216ENST00000481048 MASTLQ96GX5 879 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 MYO19Q96H55 970 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 NUP98P52948 1817 aa8.54□□□□□ -1.04
LRCH3-216ENST00000481048 KLRG2A4D1S0 409 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-216ENST00000481048 KCNQ3O43525 872 aa8.53□□□□□ -1.04
LRCH3-216ENST00000481048 DEAF1O75398 565 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-216ENST00000481048 SRGNP10124 158 aa8.53□□□□□ -1.04
LRCH3-216ENST00000481048 NRLP54845 237 aa8.53□□□□□ -1.04
LRCH3-216ENST00000481048 JMYQ8N9B5 988 aa8.53□□□□□ -1.04
LRCH3-216ENST00000481048 MEGF10Q96KG7 1140 aa8.53□□□□□ -1.04
LRCH3-216ENST00000481048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.53□□□□□ -1.04
LRCH3-216ENST00000481048 TLR7Q9NYK1 1049 aaKnown RBP8.53□□□□□ -1.04
LRCH3-216ENST00000481048 SCN4AP35499 1836 aa8.52□□□□□ -1.04
LRCH3-216ENST00000481048 TIAM2Q8IVF5 1701 aa8.52□□□□□ -1.05
LRCH3-216ENST00000481048 XYLBO75191 536 aa8.52□□□□□ -1.05
LRCH3-216ENST00000481048 PRELPP51888 382 aa8.52□□□□□ -1.05
LRCH3-216ENST00000481048 MCM10Q7L590 875 aa8.52□□□□□ -1.05
LRCH3-216ENST00000481048 NBPF5PQ86XG9 351 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-216ENST00000481048 RGL4Q8IZJ4 473 aa8.52□□□□□ -1.05
LRCH3-216ENST00000481048 CMTR1Q8N1G2 835 aaKnown RBP8.52□□□□□ -1.05
LRCH3-216ENST00000481048 LRFN2Q9ULH4 789 aa8.52□□□□□ -1.05
LRCH3-216ENST00000481048 COL11A2P13942 1736 aaPredicted RBP8.51□□□□□ -1.05
LRCH3-216ENST00000481048 ERVV-1B6SEH8 477 aa8.51□□□□□ -1.05
LRCH3-216ENST00000481048 J3QW42 95 aa8.51□□□□□ -1.05
LRCH3-216ENST00000481048 EGFRP00533 1210 aa8.51□□□□□ -1.05
LRCH3-216ENST00000481048 NPR1P16066 1061 aa8.51□□□□□ -1.05
LRCH3-216ENST00000481048 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
LRCH3-216ENST00000481048 TAOK3Q9H2K8 898 aa8.51□□□□□ -1.05
LRCH3-216ENST00000481048 DLL1O00548 723 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms