RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 MCM9Q9NXL9 1143 aa20.56■□□□□ 0.88
LSG1-208ENST00000480853 ERVK-9P63128 1117 aa20.55■□□□□ 0.88
LSG1-208ENST00000480853 ERVK-24P63145 666 aa20.55■□□□□ 0.88
LSG1-208ENST00000480853 SEPT2Q15019 361 aa20.55■□□□□ 0.88
LSG1-208ENST00000480853 CERS3Q8IU89 383 aa20.55■□□□□ 0.88
LSG1-208ENST00000480853 DIS3LQ8TF46 1054 aaKnown RBP20.55■□□□□ 0.88
LSG1-208ENST00000480853 TRIB2Q92519 343 aa20.55■□□□□ 0.88
LSG1-208ENST00000480853 FEZ1Q99689 392 aa20.55■□□□□ 0.88
LSG1-208ENST00000480853 CRNKL1Q9BZJ0 848 aaKnown RBP20.55■□□□□ 0.88
LSG1-208ENST00000480853 CRISPLD2Q9H0B8 497 aa20.55■□□□□ 0.88
LSG1-208ENST00000480853 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.55■□□□□ 0.88
LSG1-208ENST00000480853 DCP1AQ9NPI6 582 aaPredicted RBP20.55■□□□□ 0.88
LSG1-208ENST00000480853 PAG1Q9NWQ8 432 aa20.55■□□□□ 0.88
LSG1-208ENST00000480853 HMGCRP04035 888 aa20.54■□□□□ 0.88
LSG1-208ENST00000480853 FXR1P51114 621 aaKnown RBP eCLIP20.54■□□□□ 0.88
LSG1-208ENST00000480853 CHRDL2Q6WN34 429 aa20.54■□□□□ 0.88
LSG1-208ENST00000480853 CATSPERGQ6ZRH7 1159 aa20.54■□□□□ 0.88
LSG1-208ENST00000480853 PAWRQ96IZ0 340 aaKnown RBP20.54■□□□□ 0.88
LSG1-208ENST00000480853 C12orf42Q96LP6 360 aa20.54■□□□□ 0.88
LSG1-208ENST00000480853 CABP5Q9NP86 173 aa20.54■□□□□ 0.88
LSG1-208ENST00000480853 CYP2D7A0A087X1C5 515 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 A0A1W2PRG0 241 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L15C9J2P7 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L13C9JLJ4 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L11C9JVI0 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L18D6R9N7 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L22D6RA61 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L17D6RBQ6 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L19D6RCP7 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L20D6RJB6 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 ATP5JP18859 108 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 USP17L24Q0WX57 530 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 CCL14Q16627 93 aa20.53■□□□□ 0.88
LSG1-208ENST00000480853 BAZ2AQ9UIF9 1905 aaKnown RBP20.53■□□□□ 0.88
LSG1-208ENST00000480853 NAV1Q8NEY1 1877 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 MBD4O95243 580 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 VCAM1P19320 739 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 ADD2P35612 726 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 KIAA1755Q5JYT7 1200 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 TMED8Q6PL24 325 aaPredicted RBP20.52■□□□□ 0.88
LSG1-208ENST00000480853 GPR142Q7Z601 462 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 USP6NLQ92738 828 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 HAUS7Q99871 368 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 NUDT12Q9BQG2 462 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 KIAA1683Q9H0B3 1180 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 BTBD7Q9P203 1132 aa20.52■□□□□ 0.88
LSG1-208ENST00000480853 DDX60LQ5H9U9 1706 aaKnown RBP20.52■□□□□ 0.88
LSG1-208ENST00000480853 RPTORQ8N122 1335 aa20.52■□□□□ 0.87
LSG1-208ENST00000480853 MPHOSPH10O00566 681 aaKnown RBP20.51■□□□□ 0.87
LSG1-208ENST00000480853 MNX1P50219 401 aaPredicted RBP20.51■□□□□ 0.87
LSG1-208ENST00000480853 MORN1Q5T089 497 aa20.51■□□□□ 0.87
LSG1-208ENST00000480853 CLEC10AQ8IUN9 316 aa20.51■□□□□ 0.87
LSG1-208ENST00000480853 HTATIP2Q9BUP3 242 aa20.51■□□□□ 0.87
LSG1-208ENST00000480853 RPAP3Q9H6T3 665 aaPredicted RBP20.51■□□□□ 0.87
LSG1-208ENST00000480853 MAPK4P31152 587 aa20.5■□□□□ 0.87
LSG1-208ENST00000480853 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
LSG1-208ENST00000480853 PLEKHH3Q7Z736 793 aa20.5■□□□□ 0.87
LSG1-208ENST00000480853 SIAH1Q8IUQ4 282 aa20.5■□□□□ 0.87
LSG1-208ENST00000480853 HMX1Q9NP08 348 aaPredicted RBP20.5■□□□□ 0.87
LSG1-208ENST00000480853 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
LSG1-208ENST00000480853 RABGAP1Q9Y3P9 1069 aa20.5■□□□□ 0.87
LSG1-208ENST00000480853 ALPK3Q96L96 1907 aa20.5■□□□□ 0.87
LSG1-208ENST00000480853 AKR1B1P15121 316 aa20.49■□□□□ 0.87
LSG1-208ENST00000480853 USP14P54578 494 aa20.49■□□□□ 0.87
LSG1-208ENST00000480853 CACNB2Q08289 660 aaPredicted RBP20.49■□□□□ 0.87
LSG1-208ENST00000480853 MAP3K21Q5TCX8 1036 aa20.49■□□□□ 0.87
LSG1-208ENST00000480853 CCAR1Q8IX12 1150 aaKnown RBP20.49■□□□□ 0.87
LSG1-208ENST00000480853 LRRCC1Q9C099 1032 aa20.49■□□□□ 0.87
LSG1-208ENST00000480853 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
LSG1-208ENST00000480853 RANBP2P49792 3224 aaKnown RBP20.48■□□□□ 0.87
LSG1-208ENST00000480853 PRKAR2AP13861 404 aaKnown RBP20.48■□□□□ 0.87
LSG1-208ENST00000480853 PUS7LQ9H0K6 701 aaKnown RBP20.48■□□□□ 0.87
LSG1-208ENST00000480853 SPDYE16A6NNV3 312 aaPredicted RBP20.47■□□□□ 0.87
LSG1-208ENST00000480853 USP17L12C9JPN9 530 aa20.47■□□□□ 0.87
LSG1-208ENST00000480853 USP17L21D6R901 530 aa20.47■□□□□ 0.87
LSG1-208ENST00000480853 XRCC5P13010 732 aaKnown RBP20.47■□□□□ 0.87
LSG1-208ENST00000480853 CCND3P30281 292 aaPredicted RBP20.47■□□□□ 0.87
LSG1-208ENST00000480853 WDR78Q5VTH9 848 aa20.47■□□□□ 0.87
LSG1-208ENST00000480853 TSHZ3Q63HK5 1081 aa20.47■□□□□ 0.87
LSG1-208ENST00000480853 CHMP4BQ9H444 224 aaKnown RBP20.47■□□□□ 0.87
LSG1-208ENST00000480853 FLRT1Q9NZU1 646 aa20.47■□□□□ 0.87
LSG1-208ENST00000480853 EVI5O60447 810 aa20.46■□□□□ 0.87
LSG1-208ENST00000480853 CDK8P49336 464 aa20.46■□□□□ 0.87
LSG1-208ENST00000480853 C12orf60Q5U649 245 aa20.46■□□□□ 0.87
LSG1-208ENST00000480853 NECAB2Q7Z6G3 386 aa20.46■□□□□ 0.87
LSG1-208ENST00000480853 GTF3C2Q8WUA4 911 aaPredicted RBP20.46■□□□□ 0.87
LSG1-208ENST00000480853 SOCS4Q8WXH5 440 aa20.46■□□□□ 0.87
LSG1-208ENST00000480853 NR2E3Q9Y5X4 410 aa20.46■□□□□ 0.87
LSG1-208ENST00000480853 MYH7P12883 1935 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 ZKSCAN1P17029 563 aaPredicted RBP20.45■□□□□ 0.86
LSG1-208ENST00000480853 PTPREP23469 700 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 RGS2P41220 211 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 UBE3CQ15386 1083 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 NPLOC4Q8TAT6 608 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.45■□□□□ 0.86
LSG1-208ENST00000480853 PRO3102Q9H379 93 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 DCTPP1Q9H773 170 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 ATP8A2Q9NTI2 1148 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 OGDHLQ9ULD0 1010 aa20.45■□□□□ 0.86
LSG1-208ENST00000480853 SLC4A4Q9Y6R1 1079 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms