RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 ANKRD20A3Q5VUR7 823 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 RBSNQ9H1K0 784 aa10.55□□□□□ -0.72
VEGFA-212ENST00000480614 MBD4O95243 580 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 SDCCAG3Q96C92 435 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 DNAJC8O75937 253 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-212ENST00000480614 CCDC184Q52MB2 194 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 EIF3CLB5ME19 914 aaKnown RBP10.54□□□□□ -0.72
VEGFA-212ENST00000480614 EIF3CQ99613 913 aaKnown RBP10.54□□□□□ -0.72
VEGFA-212ENST00000480614 RNF40O75150 1001 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-212ENST00000480614 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 RTEL1Q9NZ71 1219 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 ZNF174Q15697 407 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 RIC8AQ9NPQ8 531 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
VEGFA-212ENST00000480614 RUNDC3BQ96NL0 473 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 BICC1Q9H694 974 aaKnown RBP10.54□□□□□ -0.72
VEGFA-212ENST00000480614 WDR70Q9NW82 654 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 PARD3Q8TEW0 1356 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 UFL1O94874 794 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 BAG5Q9UL15 447 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 POSTNQ15063 836 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 IFIH1Q9BYX4 1025 aaKnown RBP10.54□□□□□ -0.72
VEGFA-212ENST00000480614 KRT12Q99456 494 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 KRT81Q14533 505 aa10.54□□□□□ -0.72
VEGFA-212ENST00000480614 MROH5Q6ZUA9 1318 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 CHMLP26374 656 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 RGS16O15492 202 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-212ENST00000480614 OTUD6AQ7L8S5 288 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 CCDC105Q8IYK2 499 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 TFCP2L1Q9NZI6 479 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 NR1I2O75469 434 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 TROVE2P10155 538 aaKnown RBP eCLIP10.53□□□□□ -0.72
VEGFA-212ENST00000480614 BBOF1Q8ND07 529 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 SLC17A8Q8NDX2 589 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 TFCP2Q12800 502 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 RSAD2Q8WXG1 361 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 EVI5O60447 810 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 MIGA1Q8NAN2 632 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 ABCC10Q5T3U5 1492 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 GGA1Q9UJY5 639 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 KDM2BQ8NHM5 1336 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 GPATCH8Q9UKJ3 1502 aaKnown RBP10.53□□□□□ -0.72
VEGFA-212ENST00000480614 POLR2DO15514 142 aaKnown RBP10.53□□□□□ -0.72
VEGFA-212ENST00000480614 MYRIPQ8NFW9 859 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 MAGEF1Q9HAY2 307 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 PALM3A6NDB9 673 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-212ENST00000480614 ANXA1P04083 346 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 MAN1A1P33908 653 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 NLRP12P59046 1061 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 PRR16Q569H4 304 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 GBP5Q96PP8 586 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 SBNO2Q9Y2G9 1366 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 PRPF6O94906 941 aaKnown RBP10.53□□□□□ -0.72
VEGFA-212ENST00000480614 CHRNA2Q15822 529 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 CLSTN2Q9H4D0 955 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 THEGQ9P2T0 379 aa10.53□□□□□ -0.72
VEGFA-212ENST00000480614 FANCCQ00597 558 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 TNFAIP1Q13829 316 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 APPBP2Q92624 585 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 CSRNP1Q96S65 589 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 IGHDP01880 384 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 ZNF75DP51815 510 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 SLFN12Q8IYM2 578 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 SSH2Q76I76 1423 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 SP4Q02446 784 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 WHAMMP3Q1A5X7 153 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 GALNT17Q6IS24 598 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 USP26Q9BXU7 913 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 UHRF1BP1Q6BDS2 1440 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 TRAPPC8Q9Y2L5 1435 aa10.52□□□□□ -0.72
VEGFA-212ENST00000480614 KRT15P19012 456 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 MYH9P35579 1960 aaKnown RBP10.52□□□□□ -0.73
VEGFA-212ENST00000480614 NELFBQ8WX92 580 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 CHMP2AO43633 222 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 TRIML1Q8N9V2 468 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 WWC3Q9ULE0 1092 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.52□□□□□ -0.737e-22■■■□□ 16.8
VEGFA-212ENST00000480614 GCNT3O95395 438 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 HERC4Q5GLZ8 1057 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-212ENST00000480614 DRC3Q9H069 523 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 DNMT1P26358 1616 aaKnown RBP10.52□□□□□ -0.73
VEGFA-212ENST00000480614 S100BP04271 92 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-212ENST00000480614 BRD3Q15059 726 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 NONOQ15233 471 aaKnown RBP eCLIP10.52□□□□□ -0.735e-6■□□□□ 9.8
VEGFA-212ENST00000480614 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 AMFRQ9UKV5 643 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 LUC7L3O95232 432 aaKnown RBP10.52□□□□□ -0.73
VEGFA-212ENST00000480614 PLIN2Q99541 437 aa10.52□□□□□ -0.73
VEGFA-212ENST00000480614 TYW1Q9NV66 732 aaKnown RBP10.52□□□□□ -0.73
VEGFA-212ENST00000480614 LARSQ9P2J5 1176 aaKnown RBP10.52□□□□□ -0.73
VEGFA-212ENST00000480614 TRIM50Q86XT4 487 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 MYCBPQ99417 103 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-212ENST00000480614 ZNF202O95125 648 aa10.51□□□□□ -0.73
VEGFA-212ENST00000480614 XRCC5P13010 732 aaKnown RBP10.51□□□□□ -0.73
VEGFA-212ENST00000480614 PSMD6Q15008 389 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms