RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 TXLNAP40222 546 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 RFC5P40937 340 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 LINC00301Q8NCQ3 95 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 BPIFA3Q9BQP9 254 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 H7C1W4 665 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 FOXP2O15409 715 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 SYNE3Q6ZMZ3 975 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
COMMD4-203ENST00000480484 PACS2Q86VP3 889 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 LZTFL1Q9NQ48 299 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 JRKLQ9Y4A0 524 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 COL5A2P05997 1499 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-203ENST00000480484 KCPQ6ZWJ8 1503 aa11.53□□□□□ -0.56
COMMD4-203ENST00000480484 IVLP07476 585 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 PDIA3P30101 505 aaKnown RBP11.52□□□□□ -0.56
COMMD4-203ENST00000480484 PNOCQ13519 176 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 SCARF1Q14162 830 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 JAKMIP3Q5VZ66 844 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 DHX32Q7L7V1 743 aaKnown RBP11.52□□□□□ -0.56
COMMD4-203ENST00000480484 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 SYNE4Q8N205 404 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 FANCLQ9NW38 375 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 RTEL1Q9NZ71 1219 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 LAMA4Q16363 1823 aa11.52□□□□□ -0.56
COMMD4-203ENST00000480484 E7EWF7 191 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 TOM1O60784 492 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 PFKFB1P16118 471 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 CHMP4BP1P59074 171 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 MYL5Q02045 173 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 GRIN1Q05586 938 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.57
COMMD4-203ENST00000480484 ATL3Q6DD88 541 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 CTR9Q6PD62 1173 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 VSTM4Q8IW00 320 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 COL4A3BPQ9Y5P4 624 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 A0A1W2PQ27 194 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 A0A1W2PQ64 194 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 A0A1W2PQD8 194 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 CCDC151A5D8V7 595 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 EIF3CLB5ME19 914 aaKnown RBP11.52□□□□□ -0.57
COMMD4-203ENST00000480484 RHOXF2BP0C7M4 288 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 MTF1Q14872 753 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 CMTR1Q8N1G2 835 aaKnown RBP11.52□□□□□ -0.57
COMMD4-203ENST00000480484 KCNG4Q8TDN1 519 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 EIF3CQ99613 913 aaKnown RBP11.52□□□□□ -0.57
COMMD4-203ENST00000480484 RHOXF2Q9BQY4 288 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-203ENST00000480484 TJP1Q07157 1748 aa11.52□□□□□ -0.57
COMMD4-203ENST00000480484 ABL1P00519 1130 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 ADORA1P30542 326 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 PDE4BQ07343 736 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 SART3Q15020 963 aaKnown RBP11.51□□□□□ -0.57
COMMD4-203ENST00000480484 HSP90B2PQ58FF3 399 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 STK32AQ8WU08 396 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 PSD3Q9NYI0 1048 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 IL2RBP14784 551 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 CASP1P29466 404 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
COMMD4-203ENST00000480484 OLFM4Q6UX06 510 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 TRMT44Q8IYL2 757 aaKnown RBP11.51□□□□□ -0.57
COMMD4-203ENST00000480484 PHKBQ93100 1093 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 OSBP2Q969R2 916 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 C8orf76Q96K31 380 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 HAUS7Q99871 368 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 SEC31BQ9NQW1 1179 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
COMMD4-203ENST00000480484 HDXQ7Z353 690 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 FOXP4Q8IVH2 680 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-203ENST00000480484 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 CARMIL3Q8ND23 1372 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 NUP188Q5SRE5 1749 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 IKBKBO14920 756 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 EIF3JO75822 258 aaKnown RBP11.5□□□□□ -0.57
COMMD4-203ENST00000480484 HSPD1P10809 573 aaKnown RBP11.5□□□□□ -0.57
COMMD4-203ENST00000480484 MAGEA9P43362 315 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 SYKP43405 635 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 BRD3Q15059 726 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 MCMDC2Q4G0Z9 681 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 DDX27Q96GQ7 796 aaKnown RBP11.5□□□□□ -0.57
COMMD4-203ENST00000480484 INTS13Q9NVM9 706 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 ASAP1Q9ULH1 1129 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 DISP2A7MBM2 1401 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 SMIM22K7EJ46 135 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 KIFC2Q96AC6 838 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 HINFPQ9BQA5 517 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 ABCB6Q9NP58 842 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 MAP3K20Q9NYL2 800 aaKnown RBP11.5□□□□□ -0.57
COMMD4-203ENST00000480484 MAST3O60307 1309 aa11.5□□□□□ -0.57
COMMD4-203ENST00000480484 GOLGA6L9A6NEM1 432 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 MAP2K7O14733 419 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 BMP6P22004 513 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-203ENST00000480484 TNNI2P48788 182 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 TMEM139Q8IV31 216 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 UCN2Q96RP3 112 aa11.49□□□□□ -0.57
COMMD4-203ENST00000480484 PNKPQ96T60 521 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms