RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CASC1Q6TDU7 716 aa14.54□□□□□ -0.08
TRA2B-212ENST00000480461 KIAA1211Q6ZU35 1233 aa14.54□□□□□ -0.08
TRA2B-212ENST00000480461 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
TRA2B-212ENST00000480461 ROBO3Q96MS0 1386 aa14.54□□□□□ -0.08
TRA2B-212ENST00000480461 NAV1Q8NEY1 1877 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 UNCXA6NJT0 531 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 ZNF213O14771 459 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 GH2P01242 217 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 PTPRAP18433 802 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 SP3Q02447 781 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 STOX1Q6ZVD7 989 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 SCYL3Q8IZE3 742 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 OTUD5Q96G74 571 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 TMEM106CQ9BVX2 250 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 USP26Q9BXU7 913 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 SWAP70Q9UH65 585 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 CTNNA3Q9UI47 895 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 OTOFQ9HC10 1997 aa14.53□□□□□ -0.08
TRA2B-212ENST00000480461 H0YGN5 161 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 SLC27A2O14975 620 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 FAM47AQ5JRC9 791 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 AKNAD1Q5T1N1 836 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 AMOTL1Q8IY63 956 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 RASEFQ8IZ41 740 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 PTPN18Q99952 460 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 TRIM34Q9BYJ4 488 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 ZHX2Q9Y6X8 837 aa14.52□□□□□ -0.09
TRA2B-212ENST00000480461 SPDYE5A6NIY4 337 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 SEPT2Q15019 361 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 IMMTQ16891 758 aaKnown RBP14.51□□□□□ -0.09
TRA2B-212ENST00000480461 ABCB5Q2M3G0 1257 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 SLC9C1Q4G0N8 1177 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 CREB3L3Q68CJ9 461 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 OTUD7BQ6GQQ9 843 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 CLEC10AQ8IUN9 316 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 STAG1Q8WVM7 1258 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 OPTNQ96CV9 577 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 MKNK2Q9HBH9 465 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 IL17RBQ9NRM6 502 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 TAOK2Q9UL54 1235 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 ZBTB21Q9ULJ3 1066 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 AFG3L2Q9Y4W6 797 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 CSADQ9Y600 493 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 PTCH2Q9Y6C5 1203 aa14.51□□□□□ -0.09
TRA2B-212ENST00000480461 NEDD4P46934 1319 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 IGKV6D-41A0A0C4DH26 115 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 TESPA1A2RU30 521 aaPredicted RBP14.5□□□□□ -0.09
TRA2B-212ENST00000480461 IRF6O14896 467 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 ORC4O43929 436 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 TFAP4Q01664 338 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 ERO1BQ86YB8 467 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 ZNF444Q8N0Y2 327 aaPredicted RBP14.5□□□□□ -0.09
TRA2B-212ENST00000480461 KCNB2Q92953 911 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 MS4A4AQ96JQ5 239 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 CCDC17Q96LX7 622 aa14.5□□□□□ -0.09
TRA2B-212ENST00000480461 A0A1W2PRG0 241 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 E7EWF7 191 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 MPHOSPH10O00566 681 aaKnown RBP14.49□□□□□ -0.09
TRA2B-212ENST00000480461 NMT2O60551 498 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 ASNSP08243 561 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 HSPA4P34932 840 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 PPATQ06203 517 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 PDE4BQ07343 736 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 CHRDL2Q6WN34 429 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 MFSD6Q6ZSS7 791 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 NEDD1Q8NHV4 660 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 ACER1Q8TDN7 264 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 ZSWIM5Q9P217 1185 aa14.49□□□□□ -0.09
TRA2B-212ENST00000480461 USP17L5A8MUK1 530 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 B4E1Z4 1266 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 REC8O95072 547 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 SLC3A2P08195 630 aaKnown RBP14.48□□□□□ -0.09
TRA2B-212ENST00000480461 SPP2Q13103 211 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 MOGSQ13724 837 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 RAB3GAP1Q15042 981 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 ADCK5Q3MIX3 580 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 RRP12Q5JTH9 1297 aaKnown RBP14.48□□□□□ -0.09
TRA2B-212ENST00000480461 CYB5R4Q7L1T6 521 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 NBPF11Q86T75 865 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 WDR18Q9BV38 432 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 PICK1Q9NRD5 415 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 ZSWIM8A7E2V4 1837 aa14.48□□□□□ -0.09
TRA2B-212ENST00000480461 DLL1O00548 723 aa14.47□□□□□ -0.09
TRA2B-212ENST00000480461 RANBP6O60518 1105 aaKnown RBP14.47□□□□□ -0.09
TRA2B-212ENST00000480461 PPIL2Q13356 520 aa14.47□□□□□ -0.09
TRA2B-212ENST00000480461 TSGA10IPQ3SY00 556 aa14.47□□□□□ -0.09
TRA2B-212ENST00000480461 KIAA1755Q5JYT7 1200 aa14.47□□□□□ -0.09
TRA2B-212ENST00000480461 TMEM179Q6ZVK1 233 aa14.47□□□□□ -0.09
TRA2B-212ENST00000480461 CABP5Q9NP86 173 aa14.47□□□□□ -0.09
TRA2B-212ENST00000480461 GINM1Q9NU53 330 aa14.47□□□□□ -0.09
TRA2B-212ENST00000480461 RBM27Q9P2N5 1060 aaKnown RBP14.47□□□□□ -0.09
TRA2B-212ENST00000480461 KCNH4Q9UQ05 1017 aa14.47□□□□□ -0.09
TRA2B-212ENST00000480461 TRIM75PA6NK02 468 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 KDM4AO75164 1064 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 MYCP01106 439 aaPredicted RBP14.46□□□□□ -0.09
TRA2B-212ENST00000480461 EEF2P13639 858 aaKnown RBP14.46□□□□□ -0.09
TRA2B-212ENST00000480461 NOVP48745 357 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 RCSD1Q6JBY9 416 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 ZNF280CQ8ND82 737 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 CEP95Q96GE4 821 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms