RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 ZSCAN25Q6NSZ9 544 aa12.99□□□□□ -0.33
CNKSR1-204ENST00000480348 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
CNKSR1-204ENST00000480348 NUDT12Q9BQG2 462 aa12.99□□□□□ -0.33
CNKSR1-204ENST00000480348 UNC93B1Q9H1C4 597 aa12.99□□□□□ -0.33
CNKSR1-204ENST00000480348 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
CNKSR1-204ENST00000480348 ATP8A2Q9NTI2 1148 aa12.99□□□□□ -0.33
CNKSR1-204ENST00000480348 MCM9Q9NXL9 1143 aa12.99□□□□□ -0.33
CNKSR1-204ENST00000480348 ALPK3Q96L96 1907 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 TCRBV5S4A2TA0A5A2 114 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 MBD4O95243 580 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 XRCC5P13010 732 aaKnown RBP12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 SHMT1P34896 483 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 ADD2P35612 726 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 ERVK-9P63128 1117 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 ERVK-24P63145 666 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 JAG1P78504 1218 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 GABPAQ06546 454 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 USP17L24Q0WX57 530 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 ARMT1Q9H993 441 aa12.98□□□□□ -0.33
CNKSR1-204ENST00000480348 RPTORQ8N122 1335 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 VCAM1P19320 739 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 PLCD1P51178 756 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 UBE3CQ15386 1083 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 LBX2Q6XYB7 198 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 TMEM179Q6ZVK1 233 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 ANKLE1Q8NAG6 615 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 SH2D4AQ9H788 454 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 CWC22Q9HCG8 908 aaKnown RBP12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 DCP1AQ9NPI6 582 aaPredicted RBP12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 GJD2Q9UKL4 321 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 CEP290O15078 2479 aa12.97□□□□□ -0.33
CNKSR1-204ENST00000480348 RLFQ13129 1914 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 ERC2O15083 957 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 RGS2P41220 211 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 SLFNL1Q499Z3 407 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 HABP4Q5JVS0 413 aaKnown RBP12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 ANKRD45Q5TZF3 282 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 SDR42E1Q8WUS8 393 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 DPF3Q92784 378 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 DEFB118Q96PH6 123 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 APBA2Q99767 749 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 PAGR1Q9BTK6 254 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 CRISPLD2Q9H0B8 497 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 TXNRD2Q9NNW7 524 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.33
CNKSR1-204ENST00000480348 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 TFRCP02786 760 aaKnown RBP12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 ZKSCAN1P17029 563 aaPredicted RBP12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 AAMPQ13685 434 aa12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 ZYXQ15942 572 aaKnown RBP12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 CATSPERGQ6ZRH7 1159 aa12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 LPAR1Q92633 364 aa12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 CCDC17Q96LX7 622 aa12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 ARHGEF10LQ9HCE6 1279 aa12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 RBPJLQ9UBG7 517 aa12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 MYH4Q9Y623 1939 aa12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 COL11A1P12107 1806 aaPredicted RBP12.95□□□□□ -0.34
CNKSR1-204ENST00000480348 TTC41PQ6P2S7 1318 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 PRKAB2O43741 272 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 CHGBP05060 677 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 MX1P20591 662 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 HDAC1Q13547 482 aaPredicted RBP12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 PLEKHH3Q7Z736 793 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 KBTBD3Q8NAB2 608 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 TRIB2Q92519 343 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 RPAP3Q9H6T3 665 aaPredicted RBP12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 ARPP21Q9UBL0 812 aaPredicted RBP12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 SLC4A4Q9Y6R1 1079 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
CNKSR1-204ENST00000480348 H0YGN5 161 aa12.93□□□□□ -0.34
CNKSR1-204ENST00000480348 CYP2B6P20813 491 aa12.93□□□□□ -0.34
CNKSR1-204ENST00000480348 ICA1Q05084 483 aa12.93□□□□□ -0.34
CNKSR1-204ENST00000480348 SEPT2Q15019 361 aa12.93□□□□□ -0.34
CNKSR1-204ENST00000480348 MAP3K21Q5TCX8 1036 aa12.93□□□□□ -0.34
CNKSR1-204ENST00000480348 NECAB2Q7Z6G3 386 aa12.93□□□□□ -0.34
CNKSR1-204ENST00000480348 MB21D1Q8N884 522 aa12.93□□□□□ -0.34
CNKSR1-204ENST00000480348 EXOC6Q8TAG9 804 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms