RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 NYAP2Q9P242 653 aa19.76■□□□□ 0.75
SCAMP3-207ENST00000480219 PFKFB2O60825 505 aa19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 PDIA3P30101 505 aaKnown RBP19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 MAP3K11Q16584 847 aa19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 NOL9Q5SY16 702 aaKnown RBP19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 IFIT1BQ5T764 474 aaKnown RBP19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 MAP3K14Q99558 947 aa19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 GLIS2Q9BZE0 524 aaPredicted RBP19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 ZBTB21Q9ULJ3 1066 aa19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 HPS5Q9UPZ3 1129 aa19.75■□□□□ 0.75
SCAMP3-207ENST00000480219 KLF18A0A0U1RQI7 1052 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 LARGE1O95461 756 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 TTLL1O95922 423 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 GH2P01242 217 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 ASNSP08243 561 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 TOP1P11387 765 aaKnown RBP19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 TROAPQ12815 778 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 PRAMEF18Q5VWM3 479 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 SIAH1Q8IUQ4 282 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 CABP5Q9NP86 173 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 ATAD5Q96QE3 1844 aa19.74■□□□□ 0.75
SCAMP3-207ENST00000480219 DOCK1Q14185 1865 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 CCDC69A6NI79 296 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 USP2O75604 605 aaPredicted RBP19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 DDAH1O94760 285 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 GDF11O95390 407 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 ST3GAL1Q11201 340 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 PPP2R5BQ15173 497 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 SHROOM1Q2M3G4 852 aaPredicted RBP19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 ZNF654Q8IZM8 581 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 GTF3C6Q969F1 213 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 INTS4Q96HW7 963 aaKnown RBP19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 TMEM47Q9BQJ4 181 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 CLEC11AQ9Y240 323 aa19.73■□□□□ 0.75
SCAMP3-207ENST00000480219 UNCXA6NJT0 531 aa19.72■□□□□ 0.75
SCAMP3-207ENST00000480219 SEPT2Q15019 361 aa19.72■□□□□ 0.75
SCAMP3-207ENST00000480219 MAP1SQ66K74 1059 aaPredicted RBP19.72■□□□□ 0.75
SCAMP3-207ENST00000480219 LARP6Q9BRS8 491 aaKnown RBP19.72■□□□□ 0.75
SCAMP3-207ENST00000480219 SLC12A7Q9Y666 1083 aa19.72■□□□□ 0.75
SCAMP3-207ENST00000480219 MPHOSPH10O00566 681 aaKnown RBP19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 ZBTB43O43298 467 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 PPP1R12BO60237 982 aaPredicted RBP19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 CALM1P0DP23 149 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 CALM2P0DP24 149 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 CALM3P0DP25 149 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 NF2P35240 595 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 CHADLQ6NUI6 762 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 DLK2Q6UY11 383 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 CATIPQ7Z7H3 387 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 SCYL3Q8IZE3 742 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 PNMA1Q8ND90 353 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 CHMP4CQ96CF2 233 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 KAT14Q9H8E8 782 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 STX8Q9UNK0 236 aa19.71■□□□□ 0.75
SCAMP3-207ENST00000480219 GOLGA8BA8MQT2 603 aa19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 SNHG28P0DPA3 235 aa19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 INPP5BP32019 993 aa19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 ICA1Q05084 483 aa19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 SCRN1Q12765 414 aa19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 NFXL1Q6ZNB6 911 aa19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 NOL8Q76FK4 1167 aaKnown RBP19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 WRNIP1Q96S55 665 aa19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 FAM217BQ9NTX9 383 aaPredicted RBP19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 OTOFQ9HC10 1997 aa19.7■□□□□ 0.74
SCAMP3-207ENST00000480219 KIF3CO14782 793 aa19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 ITGBL1O95965 494 aaPredicted RBP19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 EEF2P13639 858 aaKnown RBP19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 FKBP1BP68106 108 aa19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 SYNE3Q6ZMZ3 975 aa19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 ZNF526Q8TF50 670 aaPredicted RBP19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 WDR18Q9BV38 432 aa19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 SLKQ9H2G2 1235 aaPredicted RBP19.69■□□□□ 0.74
SCAMP3-207ENST00000480219 MYH4Q9Y623 1939 aa19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 IREB2P48200 963 aaKnown RBP19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 METAP2P50579 478 aaKnown RBP eCLIP19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 MAP3K9P80192 1104 aa19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 LDLRAD1Q5T700 205 aa19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 CLEC10AQ8IUN9 316 aa19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 GMCL1P1Q8NEA9 526 aa19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 GPBP1L1Q9HC44 474 aaPredicted RBP19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 CLIP2Q9UDT6 1046 aa19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 TMX2Q9Y320 296 aa19.68■□□□□ 0.74
SCAMP3-207ENST00000480219 PHIPQ8WWQ0 1821 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 A0A1W2PRG0 241 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 USP17L5A8MUK1 530 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 GRM4Q14833 912 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 RAB3GAP1Q15042 981 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 NTRK3Q16288 839 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 MICU3Q86XE3 530 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 NECAB1Q8N987 351 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 FANCBQ8NB91 859 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 ARHGEF10LQ9HCE6 1279 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 RBM28Q9NW13 759 aaKnown RBP19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 SNCAIPQ9Y6H5 919 aa19.67■□□□□ 0.74
SCAMP3-207ENST00000480219 CCDC196A0A1B0GTZ2 297 aa19.66■□□□□ 0.74
SCAMP3-207ENST00000480219 GOLGA8AA7E2F4 631 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms