RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 ABCB5Q2M3G0 1257 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 TMEM67Q5HYA8 995 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 NFXL1Q6ZNB6 911 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 WRNIP1Q96S55 665 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 ZSCAN10Q96SZ4 725 aaPredicted RBP7.56□□□□□ -1.2
HERC4-210ENST00000480158 MYL10Q9BUA6 226 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 TM6SF1Q9BZW5 370 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 IL17RBQ9NRM6 502 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 SWAP70Q9UH65 585 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 SCN4AP35499 1836 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 FOCADQ5VW36 1801 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 TNKSO95271 1327 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 POLR2AP24928 1970 aaKnown RBP7.56□□□□□ -1.2
HERC4-210ENST00000480158 ERICH2A1L162 156 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 ST18O60284 1047 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 RXRAP19793 462 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 APOBRQ0VD83 1088 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 SEPT2Q15019 361 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 TATDN1Q6P1N9 297 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 IQCA1Q86XH1 822 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 CCDC144CPQ8IYA2 1237 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 CEP95Q96GE4 821 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.56□□□□□ -1.2
HERC4-210ENST00000480158 ANGEL1Q9UNK9 670 aaKnown RBP7.56□□□□□ -1.2
HERC4-210ENST00000480158 PPP2R3BQ9Y5P8 575 aa7.56□□□□□ -1.2
HERC4-210ENST00000480158 DDX60LQ5H9U9 1706 aaKnown RBP7.55□□□□□ -1.2
HERC4-210ENST00000480158 PHF20L1A8MW92 1017 aa7.55□□□□□ -1.2
HERC4-210ENST00000480158 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
HERC4-210ENST00000480158 NF2P35240 595 aa7.55□□□□□ -1.2
HERC4-210ENST00000480158 ANP32AP39687 249 aaKnown RBP7.55□□□□□ -1.2
HERC4-210ENST00000480158 TOB2Q14106 344 aaPredicted RBP7.55□□□□□ -1.2
HERC4-210ENST00000480158 SART3Q15020 963 aaKnown RBP7.55□□□□□ -1.2
HERC4-210ENST00000480158 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
HERC4-210ENST00000480158 CHADLQ6NUI6 762 aa7.55□□□□□ -1.2
HERC4-210ENST00000480158 ENAHQ8N8S7 591 aaPredicted RBP7.55□□□□□ -1.2
HERC4-210ENST00000480158 ZNF784Q8NCA9 323 aaPredicted RBP7.55□□□□□ -1.2
HERC4-210ENST00000480158 IGDCC4Q8TDY8 1250 aa7.55□□□□□ -1.2
HERC4-210ENST00000480158 CLIP2Q9UDT6 1046 aa7.55□□□□□ -1.2
HERC4-210ENST00000480158 SSC5DA1L4H1 1573 aa7.55□□□□□ -1.2
HERC4-210ENST00000480158 TESPA1A2RU30 521 aaPredicted RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 UBE2Q2LH0YL09 131 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 KIF3CO14782 793 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 PPP1R12BO60237 982 aaPredicted RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 USP2O75604 605 aaPredicted RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 CELF2O95319 508 aaKnown RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 PRR29P0C7W0 189 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 PCP11498 1178 aaKnown RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 CAP2P40123 477 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 WTAPQ15007 396 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 ZYXQ15942 572 aaKnown RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 IFIT1BQ5T764 474 aaKnown RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 METTL16Q86W50 562 aaKnown RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 LRRC47Q8N1G4 583 aaKnown RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 TTC14Q96N46 770 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 ZNF341Q9BYN7 854 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 CABP5Q9NP86 173 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 TPCN1Q9ULQ1 816 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 LAMB1P07942 1786 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 COL2A1P02458 1487 aaPredicted RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 KLF18A0A0U1RQI7 1052 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 SH2B2O14492 632 aaPredicted RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 TBC1D12O60347 775 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 RASGRP2Q7LDG7 609 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 NECAB1Q8N987 351 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 NUP133Q8WUM0 1156 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 KLRG1Q96E93 195 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 HOOK2Q96ED9 719 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 CLMNQ96JQ2 1002 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 LY9Q9HBG7 655 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 BRPF3Q9ULD4 1205 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 ISY1Q9ULR0 285 aaKnown RBP7.54□□□□□ -1.2
HERC4-210ENST00000480158 SIPA1L1O43166 1804 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 LAMA4Q16363 1823 aa7.54□□□□□ -1.2
HERC4-210ENST00000480158 CCDC69A6NI79 296 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 LARGE1O95461 756 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 ITGBL1O95965 494 aaPredicted RBP7.53□□□□□ -1.2
HERC4-210ENST00000480158 EEF2P13639 858 aaKnown RBP7.53□□□□□ -1.2
HERC4-210ENST00000480158 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 ECE1P42892 770 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 CCT2P78371 535 aaKnown RBP7.53□□□□□ -1.2
HERC4-210ENST00000480158 ICA1Q05084 483 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 RCSD1Q6JBY9 416 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 MICU3Q86XE3 530 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 IL17RAQ96F46 866 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 TMEM87BQ96K49 555 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 CCDC17Q96LX7 622 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 TBC1D2Q9BYX2 928 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 MTMR4Q9NYA4 1195 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 ZBTB21Q9ULJ3 1066 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 MAP3K10Q02779 954 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 DGKZQ13574 1117 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 VGLL4Q14135 290 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 SEC23AQ15436 765 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 ME3Q16798 604 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.53□□□□□ -1.2
HERC4-210ENST00000480158 TMEM179Q6ZVK1 233 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 HSCBQ8IWL3 235 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 SPICE1Q8N0Z3 855 aa7.53□□□□□ -1.2
HERC4-210ENST00000480158 CCDC82Q8N4S0 544 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms