RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 KAT2BQ92831 832 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 HAUS4Q9H6D7 363 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 STRN4Q9NRL3 753 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 DENND2AQ9ULE3 1009 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 ATXN2Q99700 1313 aaKnown RBP15.31■□□□□ 0.04
C9orf78-205ENST00000480023 GLI3P10071 1580 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 NUP188Q5SRE5 1749 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 GGCXP38435 758 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 IRAK1P51617 712 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 CKAP4Q07065 602 aaKnown RBP15.31■□□□□ 0.04
C9orf78-205ENST00000480023 GBP6Q6ZN66 633 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 SENP2Q9HC62 589 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 AATFQ9NY61 560 aaKnown RBP eCLIP15.31■□□□□ 0.04
C9orf78-205ENST00000480023 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
C9orf78-205ENST00000480023 REXO2Q9Y3B8 237 aaKnown RBP15.31■□□□□ 0.04
C9orf78-205ENST00000480023 EBAG9O00559 213 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 PPFIA1Q13136 1202 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 MMS19Q96T76 1030 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 CRACR2AQ9BSW2 395 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 SLC26A6Q9BXS9 759 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 CEP126Q9P2H0 1117 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 SAR1BQ9Y6B6 198 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 FAM169AQ9Y6X4 670 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 PKD1L3Q7Z443 1732 aa15.3■□□□□ 0.04
C9orf78-205ENST00000480023 NDUFA10O95299 355 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 SPAG1Q07617 926 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 DPYDQ12882 1025 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 SART3Q15020 963 aaKnown RBP15.29■□□□□ 0.04
C9orf78-205ENST00000480023 KRT31Q15323 416 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 SLF1Q9BQI6 1058 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 SELENOOQ9BVL4 669 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 CSRNP2Q9H175 543 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 CWC25Q9NXE8 425 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-205ENST00000480023 PCDHB6Q9Y5E3 794 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 EPN1Q9Y6I3 576 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-205ENST00000480023 GOLGA6CA6NDK9 693 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 UBE2Q2LH0YL09 131 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 RNF225M0QZC1 329 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-205ENST00000480023 GCP02774 474 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 GOLGA6DP0CG33 693 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 USP8P40818 1118 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 STX17P56962 302 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 KLHL10Q6JEL2 608 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 CCNI2Q6ZMN8 369 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-205ENST00000480023 USP49Q70CQ1 688 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 RIN2Q8WYP3 895 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-205ENST00000480023 RUBCNQ92622 972 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 PAGE5Q96GU1 130 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 GOLGA6AQ9NYA3 693 aa15.29■□□□□ 0.04
C9orf78-205ENST00000480023 GRIN2DO15399 1336 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 EIF3HO15372 352 aaKnown RBP eCLIP15.28■□□□□ 0.04
C9orf78-205ENST00000480023 ZAP70P43403 619 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 PIP4K2AP48426 406 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-205ENST00000480023 CCT5P48643 541 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 SCARF1Q14162 830 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 EHBP1Q8NDI1 1231 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 ZNF594Q96JF6 807 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-205ENST00000480023 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-205ENST00000480023 A0A087X0B3 334 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 B4E1Z4 1266 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 ADORA1P30542 326 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 KRT9P35527 623 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 E2F4Q16254 413 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 KCNV1Q6PIU1 500 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 CNPY4Q8N129 248 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 AENQ8WTP8 325 aaKnown RBP15.28■□□□□ 0.04
C9orf78-205ENST00000480023 NUP88Q99567 741 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-205ENST00000480023 SH3GL2Q99962 352 aa15.28■□□□□ 0.04
C9orf78-205ENST00000480023 PUS3Q9BZE2 481 aaKnown RBP15.28■□□□□ 0.04
C9orf78-205ENST00000480023 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.04
C9orf78-205ENST00000480023 GOLGA6BA6NDN3 693 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 A6NNZ2 444 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 N4BP3O15049 544 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 ATP1A1P05023 1023 aaKnown RBP15.27■□□□□ 0.04
C9orf78-205ENST00000480023 PHKG2P15735 406 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 HNRNPH1P31943 449 aaKnown RBP15.27■□□□□ 0.04
C9orf78-205ENST00000480023 ADD2P35612 726 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 COPB1P53618 953 aaKnown RBP15.27■□□□□ 0.04
C9orf78-205ENST00000480023 TUBB8Q3ZCM7 444 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 TMEM67Q5HYA8 995 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 NFXL1Q6ZNB6 911 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 RPAINQ86UA6 219 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 FAM184BQ9ULE4 1060 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 GUCA1BQ9UMX6 200 aa15.27■□□□□ 0.04
C9orf78-205ENST00000480023 AKAP11Q9UKA4 1901 aa15.26■□□□□ 0.03
C9orf78-205ENST00000480023 ANO9A1A5B4 782 aa15.26■□□□□ 0.03
C9orf78-205ENST00000480023 GUCY1A2P33402 732 aa15.26■□□□□ 0.03
C9orf78-205ENST00000480023 CCT6AP40227 531 aaKnown RBP15.26■□□□□ 0.03
C9orf78-205ENST00000480023 LIG3P49916 1009 aa15.26■□□□□ 0.03
C9orf78-205ENST00000480023 TTC5Q8N0Z6 440 aa15.26■□□□□ 0.03
C9orf78-205ENST00000480023 DNAJC7Q99615 494 aa15.26■□□□□ 0.03
C9orf78-205ENST00000480023 CAPS2Q9BXY5 557 aa15.26■□□□□ 0.03
C9orf78-205ENST00000480023 HDAC6Q9UBN7 1215 aa15.26■□□□□ 0.03
C9orf78-205ENST00000480023 TRIM10Q9UDY6 481 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms