RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 KRT2P35908 639 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 PAK1Q13153 545 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 TYW1BQ6NUM6 668 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 UBLCP1Q8WVY7 318 aaPredicted RBP15.17■□□□□ 0.02
USP42-206ENST00000479544 HAUS7Q99871 368 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 NOC4LQ9BVI4 516 aaKnown RBP15.17■□□□□ 0.02
USP42-206ENST00000479544 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.17■□□□□ 0.02
USP42-206ENST00000479544 ADORA1P30542 326 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 UBE4AQ14139 1066 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 NOSTRINQ8IVI9 506 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 NELFBQ8WX92 580 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 OSBPL5Q9H0X9 879 aaPredicted RBP15.17■□□□□ 0.02
USP42-206ENST00000479544 E7EVH7 732 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 PLA2G4AP47712 749 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 KSR1Q8IVT5 923 aa15.17■□□□□ 0.02
USP42-206ENST00000479544 EPN1Q9Y6I3 576 aaPredicted RBP15.17■□□□□ 0.02
USP42-206ENST00000479544 PNPLA6Q8IY17 1366 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
USP42-206ENST00000479544 CYP27A1Q02318 531 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 MSL1Q68DK7 614 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 OSBP2Q969R2 916 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 INCENPQ9NQS7 918 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 ROBO2Q9HCK4 1378 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 FAM71BQ8TC56 605 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 RIN2Q8WYP3 895 aaPredicted RBP15.16■□□□□ 0.02
USP42-206ENST00000479544 PIK3C2BO00750 1634 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 GSTTP1A0A1W2PQM5 241 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 CAPS2Q9BXY5 557 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 NLRC4Q9NPP4 1024 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 POLR3EQ9NVU0 708 aa15.16■□□□□ 0.02
USP42-206ENST00000479544 TEX33O43247 280 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 SECISBP2LQ93073 1101 aaKnown RBP15.15■□□□□ 0.02
USP42-206ENST00000479544 MYCBPQ99417 103 aaPredicted RBP15.15■□□□□ 0.02
USP42-206ENST00000479544 TSG101Q99816 390 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 MAST3O60307 1309 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 IKBKBO14920 756 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 SLC7A5Q01650 507 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 ICE2Q659A1 982 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 OR8K1Q8NGG5 319 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 CABS1Q96KC9 395 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 MAN1B1Q9UKM7 699 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 A0A0G2JLW4 131 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 N4BP1O75113 896 aaKnown RBP15.15■□□□□ 0.02
USP42-206ENST00000479544 NYAP1Q6ZVC0 841 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 CTNNBL1Q8WYA6 563 aaPredicted RBP15.15■□□□□ 0.02
USP42-206ENST00000479544 JPH2Q9BR39 696 aaPredicted RBP15.15■□□□□ 0.02
USP42-206ENST00000479544 BAIAP2L1Q9UHR4 511 aa15.15■□□□□ 0.02
USP42-206ENST00000479544 MAGEA1P43355 309 aa15.14■□□□□ 0.02
USP42-206ENST00000479544 TTLL7Q6ZT98 887 aa15.14■□□□□ 0.02
USP42-206ENST00000479544 STOX1Q6ZVD7 989 aa15.14■□□□□ 0.02
USP42-206ENST00000479544 C2CD5Q86YS7 1000 aa15.14■□□□□ 0.02
USP42-206ENST00000479544 CALML4Q96GE6 196 aa15.14■□□□□ 0.02
USP42-206ENST00000479544 PAIP2Q9BPZ3 127 aaKnown RBP15.14■□□□□ 0.02
USP42-206ENST00000479544 ZNF532Q9HCE3 1301 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 ATP7BP35670 1465 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 BUB1O43683 1085 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 COL9A3Q14050 684 aaPredicted RBP15.14■□□□□ 0.01
USP42-206ENST00000479544 E2F5Q15329 346 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 CSRNP2Q9H175 543 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 CNNM2Q9H8M5 875 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 IGSF1Q8N6C5 1336 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 LOC102724159A0A0B4J2E5 919 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 M0R2C6 588 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 TUBB4BP68371 445 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 PWP2Q15269 919 aaKnown RBP15.14■□□□□ 0.01
USP42-206ENST00000479544 WHAMMP3Q1A5X7 153 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 TCEAL9Q9UHQ7 104 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 CLNS1AP54105 237 aaKnown RBP15.14■□□□□ 0.01
USP42-206ENST00000479544 SEPT7Q16181 437 aaKnown RBP15.14■□□□□ 0.01
USP42-206ENST00000479544 CCDC25Q86WR0 208 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 KAT14Q9H8E8 782 aa15.14■□□□□ 0.01
USP42-206ENST00000479544 PDE4DQ08499 809 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 DTHD1Q6ZMT9 781 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 B4GALNT4Q76KP1 1039 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 ZNF444Q8N0Y2 327 aaPredicted RBP15.13■□□□□ 0.01
USP42-206ENST00000479544 SIRT1Q96EB6 747 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 EPSTI1Q96J88 318 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 KCNJ18B7U540 433 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 DEXIO95424 95 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 KCNJ12Q14500 433 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 TTC38Q5R3I4 469 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 FAM114A1Q8IWE2 563 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 HDAC6Q9UBN7 1215 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 SEC63Q9UGP8 760 aaKnown RBP15.13■□□□□ 0.01
USP42-206ENST00000479544 FHOD1Q9Y613 1164 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 ATP8B1O43520 1251 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 RPSAP08865 295 aaKnown RBP15.13■□□□□ 0.01
USP42-206ENST00000479544 IFT88Q13099 833 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 TMTC2Q8N394 836 aa15.13■□□□□ 0.01
USP42-206ENST00000479544 TACO1Q9BSH4 297 aaKnown RBP15.13■□□□□ 0.01
USP42-206ENST00000479544 BANK1Q8NDB2 785 aa15.12■□□□□ 0.01
USP42-206ENST00000479544 VSNL1P62760 191 aa15.12■□□□□ 0.01
USP42-206ENST00000479544 PTPN12Q05209 780 aaKnown RBP15.12■□□□□ 0.01
USP42-206ENST00000479544 C2orf54Q08AI8 447 aa15.12■□□□□ 0.01
USP42-206ENST00000479544 PPFIA1Q13136 1202 aa15.12■□□□□ 0.01
USP42-206ENST00000479544 RAPGEF1Q13905 1077 aa15.12■□□□□ 0.01
USP42-206ENST00000479544 LETM2Q2VYF4 491 aa15.12■□□□□ 0.01
USP42-206ENST00000479544 SPATA1Q5VX52 437 aa15.12■□□□□ 0.01
USP42-206ENST00000479544 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms