RNA–Protein interactions for RNA: ENST00000479459.1

EPHA1-204, Transcript of EPH receptor A1, humanhuman

TSL 3

Gene EPHA1, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-204ENST00000479459 PHKA1P46020 1223 aa16.44■□□□□ 0.22
EPHA1-204ENST00000479459 RFX5P48382 616 aaPredicted RBP16.44■□□□□ 0.22
EPHA1-204ENST00000479459 KCNQ1P51787 676 aa16.44■□□□□ 0.22
EPHA1-204ENST00000479459 NHLH1Q02575 133 aa16.44■□□□□ 0.22
EPHA1-204ENST00000479459 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
EPHA1-204ENST00000479459 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
EPHA1-204ENST00000479459 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
EPHA1-204ENST00000479459 HERC5Q9UII4 1024 aaKnown RBP16.44■□□□□ 0.22
EPHA1-204ENST00000479459 PHF24Q9UPV7 400 aa16.44■□□□□ 0.22
EPHA1-204ENST00000479459 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
EPHA1-204ENST00000479459 OLFML2BQ68BL8 750 aa16.43■□□□□ 0.22
EPHA1-204ENST00000479459 C16orf59Q7L2K0 433 aa16.43■□□□□ 0.22
EPHA1-204ENST00000479459 SLF2Q8IX21 1173 aa16.43■□□□□ 0.22
EPHA1-204ENST00000479459 GNL3LQ9NVN8 582 aaKnown RBP16.43■□□□□ 0.22
EPHA1-204ENST00000479459 FANCIQ9NVI1 1328 aa16.43■□□□□ 0.22
EPHA1-204ENST00000479459 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
EPHA1-204ENST00000479459 ASNSP08243 561 aa16.42■□□□□ 0.22
EPHA1-204ENST00000479459 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
EPHA1-204ENST00000479459 DZIP1Q86YF9 867 aaKnown RBP16.42■□□□□ 0.22
EPHA1-204ENST00000479459 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
EPHA1-204ENST00000479459 CWC22Q9HCG8 908 aaKnown RBP16.42■□□□□ 0.22
EPHA1-204ENST00000479459 PLXNA1Q9UIW2 1896 aa16.42■□□□□ 0.22
EPHA1-204ENST00000479459 CCNA1P78396 465 aa16.41■□□□□ 0.22
EPHA1-204ENST00000479459 FAAP100Q0VG06 881 aa16.41■□□□□ 0.22
EPHA1-204ENST00000479459 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
EPHA1-204ENST00000479459 MICALL1Q8N3F8 863 aa16.41■□□□□ 0.22
EPHA1-204ENST00000479459 KHSRPQ92945 711 aaKnown RBP eCLIP16.41■□□□□ 0.22
EPHA1-204ENST00000479459 DNAJC18Q9H819 358 aa16.41■□□□□ 0.22
EPHA1-204ENST00000479459 BTBD7Q9P203 1132 aa16.41■□□□□ 0.22
EPHA1-204ENST00000479459 MAP4K4O95819 1239 aaPredicted RBP16.4■□□□□ 0.22
EPHA1-204ENST00000479459 FOXK2Q01167 660 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 MECOMQ03112 1051 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 RASGRF1Q13972 1273 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 SKIV2LQ15477 1246 aaKnown RBP16.4■□□□□ 0.22
EPHA1-204ENST00000479459 ATP2B3Q16720 1220 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 TMEM240Q5SV17 173 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 METTL16Q86W50 562 aaKnown RBP16.4■□□□□ 0.22
EPHA1-204ENST00000479459 UIMC1Q96RL1 719 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 TMEM39AQ9NV64 488 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 PDS5AQ29RF7 1337 aaKnown RBP16.4■□□□□ 0.22
EPHA1-204ENST00000479459 SIPA1L1O43166 1804 aa16.4■□□□□ 0.22
EPHA1-204ENST00000479459 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
EPHA1-204ENST00000479459 WDR78Q5VTH9 848 aa16.39■□□□□ 0.21
EPHA1-204ENST00000479459 ANKRD33Q7Z3H0 272 aa16.39■□□□□ 0.21
EPHA1-204ENST00000479459 C12orf42Q96LP6 360 aa16.39■□□□□ 0.21
EPHA1-204ENST00000479459 ABCF2Q9UG63 623 aa16.39■□□□□ 0.21
EPHA1-204ENST00000479459 PRR33A8MZF0 331 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 ERC2O15083 957 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 PQBP1O60828 265 aaKnown RBP16.38■□□□□ 0.21
EPHA1-204ENST00000479459 TIMP1P01033 207 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 EXOSC9Q06265 439 aaKnown RBP16.38■□□□□ 0.21
EPHA1-204ENST00000479459 PRAMEF19Q5SWL8 479 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 CCDC102BQ68D86 513 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L2Q6R6M4 530 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 SLC44A5Q8NCS7 719 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 TOX2Q96NM4 488 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 GINM1Q9NU53 330 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 PI4KBQ9UBF8 816 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 IVNS1ABPQ9Y6Y0 642 aa16.38■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L15C9J2P7 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L13C9JLJ4 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L11C9JVI0 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L18D6R9N7 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L22D6RA61 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L17D6RBQ6 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L19D6RCP7 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L20D6RJB6 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 ADORA2AP29274 412 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 USP17L24Q0WX57 530 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 SPTY2D1Q68D10 685 aaPredicted RBP16.37■□□□□ 0.21
EPHA1-204ENST00000479459 MFSD5Q6N075 450 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 CATSPERGQ6ZRH7 1159 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 TBX21Q9UL17 535 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 ZBTB21Q9ULJ3 1066 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 ZNF236Q9UL36 1845 aa16.37■□□□□ 0.21
EPHA1-204ENST00000479459 A0A1W2PQ45 241 aaPredicted RBP16.36■□□□□ 0.21
EPHA1-204ENST00000479459 A0A1W2PQY0 241 aa16.36■□□□□ 0.21
EPHA1-204ENST00000479459 TLL1O43897 1013 aa16.36■□□□□ 0.21
EPHA1-204ENST00000479459 COBLO75128 1261 aa16.36■□□□□ 0.21
EPHA1-204ENST00000479459 ADORA1P30542 326 aa16.36■□□□□ 0.21
EPHA1-204ENST00000479459 RAB30Q15771 203 aa16.36■□□□□ 0.21
EPHA1-204ENST00000479459 YBX2Q9Y2T7 364 aaKnown RBP16.36■□□□□ 0.21
EPHA1-204ENST00000479459 CACNA1GO43497 2377 aa16.36■□□□□ 0.21
EPHA1-204ENST00000479459 PI4K2BG5E9Z4 385 aa16.35■□□□□ 0.21
EPHA1-204ENST00000479459 GDF11O95390 407 aa16.35■□□□□ 0.21
EPHA1-204ENST00000479459 DPP9Q86TI2 863 aa16.35■□□□□ 0.21
EPHA1-204ENST00000479459 HERVK_113Q902F9 699 aa16.35■□□□□ 0.21
EPHA1-204ENST00000479459 FBXL18Q96ME1 805 aa16.35■□□□□ 0.21
EPHA1-204ENST00000479459 DHX36Q9H2U1 1008 aaKnown RBP16.35■□□□□ 0.21
EPHA1-204ENST00000479459 NKX2-4Q9H2Z4 354 aa16.35■□□□□ 0.21
EPHA1-204ENST00000479459 MSRAQ9UJ68 235 aa16.35■□□□□ 0.21
EPHA1-204ENST00000479459 TRANK1O15050 2925 aa16.35■□□□□ 0.21
EPHA1-204ENST00000479459 SPDYE16A6NNV3 312 aaPredicted RBP16.34■□□□□ 0.21
EPHA1-204ENST00000479459 CIAO1O76071 339 aa16.34■□□□□ 0.21
EPHA1-204ENST00000479459 PPIGQ13427 754 aaKnown RBP eCLIP16.34■□□□□ 0.21
EPHA1-204ENST00000479459 NSUN4Q96CB9 384 aaKnown RBP16.34■□□□□ 0.21
EPHA1-204ENST00000479459 USP44Q9H0E7 712 aa16.34■□□□□ 0.21
EPHA1-204ENST00000479459 XPNPEP3Q9NQH7 507 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms