RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 ABCB5Q2M3G0 1257 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 NBPF11Q86T75 865 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 STK11IPQ8N1F8 1099 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 ZBTB21Q9ULJ3 1066 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 PTPN22Q9Y2R2 807 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 MYH8P13535 1937 aa10.92□□□□□ -0.66
CMTM1-208ENST00000479381 USP17L10C9JJH3 530 aa10.91□□□□□ -0.66
CMTM1-208ENST00000479381 LACTBP83111 547 aaPredicted RBP10.91□□□□□ -0.66
CMTM1-208ENST00000479381 ATP2B2Q01814 1243 aa10.91□□□□□ -0.66
CMTM1-208ENST00000479381 SLFNL1Q499Z3 407 aa10.91□□□□□ -0.66
CMTM1-208ENST00000479381 B4GALNT3Q6L9W6 998 aa10.91□□□□□ -0.66
CMTM1-208ENST00000479381 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
CMTM1-208ENST00000479381 RIOK1Q9BRS2 568 aaKnown RBP10.91□□□□□ -0.66
CMTM1-208ENST00000479381 ARHGAP39Q9C0H5 1083 aa10.91□□□□□ -0.66
CMTM1-208ENST00000479381 RWDD1Q9H446 243 aaPredicted RBP10.91□□□□□ -0.66
CMTM1-208ENST00000479381 PTCH2Q9Y6C5 1203 aa10.91□□□□□ -0.66
CMTM1-208ENST00000479381 TTC41PQ6P2S7 1318 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 MYPNQ86TC9 1320 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 PTPRFP10586 1907 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 TNPO2O14787 897 aaKnown RBP10.9□□□□□ -0.66
CMTM1-208ENST00000479381 GLRX3O76003 335 aaKnown RBP10.9□□□□□ -0.66
CMTM1-208ENST00000479381 MX1P20591 662 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 TDO2P48775 406 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 MAP3K10Q02779 954 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 UBE3CQ15386 1083 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 TREML2Q5T2D2 321 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 WDR78Q5VTH9 848 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 PROCA1Q8NCQ7 364 aaPredicted RBP10.9□□□□□ -0.66
CMTM1-208ENST00000479381 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 MFRPQ9BY79 579 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 GINM1Q9NU53 330 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 SUPT16HQ9Y5B9 1047 aaKnown RBP10.9□□□□□ -0.66
CMTM1-208ENST00000479381 SIPA1L1O43166 1804 aa10.9□□□□□ -0.66
CMTM1-208ENST00000479381 BAZ2AQ9UIF9 1905 aaKnown RBP10.9□□□□□ -0.67
CMTM1-208ENST00000479381 ZSWIM8A7E2V4 1837 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 PHIPQ8WWQ0 1821 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 MINDY4BA8MYZ0 360 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 C19orf81C9J6K1 198 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 PRKAB2O43741 272 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 ZFYP08048 801 aaPredicted RBP10.89□□□□□ -0.67
CMTM1-208ENST00000479381 CYP2D6P10635 497 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 PLCD1P51178 756 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 BACE1P56817 501 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 IRX6P78412 446 aaPredicted RBP10.89□□□□□ -0.67
CMTM1-208ENST00000479381 RRP1BQ14684 758 aaKnown RBP10.89□□□□□ -0.67
CMTM1-208ENST00000479381 GPAT2Q6NUI2 795 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 C17orf99Q6UX52 265 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 KBTBD3Q8NAB2 608 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 APPBP2Q92624 585 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 COA7Q96BR5 231 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 EHD4Q9H223 541 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 DNAJC18Q9H819 358 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 DCP1AQ9NPI6 582 aaPredicted RBP10.89□□□□□ -0.67
CMTM1-208ENST00000479381 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 ISY1Q9ULR0 285 aaKnown RBP10.89□□□□□ -0.67
CMTM1-208ENST00000479381 SLC45A1Q9Y2W3 748 aa10.89□□□□□ -0.67
CMTM1-208ENST00000479381 TCRBV5S4A2TA0A5A2 114 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 RNF113AO15541 343 aaKnown RBP10.88□□□□□ -0.67
CMTM1-208ENST00000479381 GNRH1P01148 92 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 USP14P54578 494 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 PRMT2P55345 433 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 UBXN2AP68543 259 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 SHROOM1Q2M3G4 852 aaPredicted RBP10.88□□□□□ -0.67
CMTM1-208ENST00000479381 EXOC6Q8TAG9 804 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 SH3TC2Q8TF17 1288 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 WDR18Q9BV38 432 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 NACAP1Q9BZK3 213 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 LNPKQ9C0E8 428 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
CMTM1-208ENST00000479381 MKNK2Q9HBH9 465 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 ARHGEF10LQ9HCE6 1279 aa10.88□□□□□ -0.67
CMTM1-208ENST00000479381 ARPP21Q9UBL0 812 aaPredicted RBP10.88□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 USP17L21D6R901 530 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 CHGBP05060 677 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 GCLCP48506 637 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-208ENST00000479381 AAMPQ13685 434 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 MOGSQ13724 837 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 SEPT2Q15019 361 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 SLC44A5Q8NCS7 719 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 OTUD7AQ8TE49 926 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-208ENST00000479381 RILPL2Q969X0 211 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 ASCC2Q9H1I8 757 aaPredicted RBP10.87□□□□□ -0.67
CMTM1-208ENST00000479381 SH2D4AQ9H788 454 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 RYDENQ9NUL5 291 aaKnown RBP10.87□□□□□ -0.67
CMTM1-208ENST00000479381 LOC285556D6RIA3 1793 aa10.87□□□□□ -0.67
CMTM1-208ENST00000479381 CYP2D7A0A087X1C5 515 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 GPAA1O43292 621 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 SLC3A2P08195 630 aaKnown RBP10.86□□□□□ -0.67
CMTM1-208ENST00000479381 GNAT2P19087 354 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 SHMT1P34896 483 aa10.86□□□□□ -0.67
CMTM1-208ENST00000479381 ICA1Q05084 483 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms