RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
SCAMP3-206ENST00000478737 GADL1Q6ZQY3 521 aa11.9□□□□□ -0.5
SCAMP3-206ENST00000478737 TMEM179Q6ZVK1 233 aa11.9□□□□□ -0.5
SCAMP3-206ENST00000478737 OTOP1Q7RTM1 612 aa11.9□□□□□ -0.5
SCAMP3-206ENST00000478737 ACER1Q8TDN7 264 aa11.9□□□□□ -0.5
SCAMP3-206ENST00000478737 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
SCAMP3-206ENST00000478737 ANP32EQ9BTT0 268 aa11.9□□□□□ -0.5
SCAMP3-206ENST00000478737 ROBO3Q96MS0 1386 aa11.9□□□□□ -0.5
SCAMP3-206ENST00000478737 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 A0A1W2PRG0 241 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 APPP05067 770 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 AKR1B1P15121 316 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 USP14P54578 494 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 LACTBP83111 547 aaPredicted RBP11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 FBXO46Q6PJ61 603 aaPredicted RBP11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L2Q6R6M4 530 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 KANSL2Q9H9L4 492 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 DIAPH3Q9NSV4 1193 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 CPA4Q9UI42 421 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 PTPRFP10586 1907 aa11.89□□□□□ -0.51
SCAMP3-206ENST00000478737 MINDY4BA8MYZ0 360 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 FGRP09769 529 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 RASA1P20936 1047 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 GCLCP48506 637 aaPredicted RBP11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 TDO2P48775 406 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 VPS53Q5VIR6 699 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 CCDC129Q6ZRS4 1044 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 ASCC2Q9H1I8 757 aaPredicted RBP11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 EFCC1Q9HA90 598 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 ZNF287Q9HBT7 754 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 ANAPC4Q9UJX5 808 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 TMX2Q9Y320 296 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 PHIPQ8WWQ0 1821 aa11.88□□□□□ -0.51
SCAMP3-206ENST00000478737 HIP1O00291 1037 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 MPHOSPH10O00566 681 aaKnown RBP11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 FGAP02671 866 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 HSPD1P10809 573 aaKnown RBP11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 OSBPP22059 807 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 CTGFP29279 349 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 PPARAQ07869 468 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 BMP2KLQ5H9B9 411 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 P2RX7Q99572 595 aaKnown RBP11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 NAPBQ9H115 298 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 TRIM17Q9Y577 477 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 MYH4Q9Y623 1939 aa11.87□□□□□ -0.51
SCAMP3-206ENST00000478737 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 IGKV6D-41A0A0C4DH26 115 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 PRMT2P55345 433 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 KIF22Q14807 665 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 FAM110CQ1W6H9 321 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 POTEEQ6S8J3 1075 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 LBX2Q6XYB7 198 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 CATSPERGQ6ZRH7 1159 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 MKL1Q969V6 931 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 ARHGAP39Q9C0H5 1083 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 MKNK2Q9HBH9 465 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 MORF4L1Q9UBU8 362 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L15C9J2P7 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L13C9JLJ4 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L11C9JVI0 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L18D6R9N7 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L22D6RA61 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L17D6RBQ6 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L19D6RCP7 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L20D6RJB6 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 SLC3A2P08195 630 aaKnown RBP11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 EEF2P13639 858 aaKnown RBP11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 VCAM1P19320 739 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 PSMC4P43686 418 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 ICA1Q05084 483 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 PDE4BQ07343 736 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 USP17L24Q0WX57 530 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 ZNF444Q8N0Y2 327 aaPredicted RBP11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 ANKRD13CQ8N6S4 541 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 GTF3C2Q8WUA4 911 aaPredicted RBP11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 LPAR1Q92633 364 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 TRIM47Q96LD4 638 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 FEZ1Q99689 392 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 ARHGEF10LQ9HCE6 1279 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 RBPJLQ9UBG7 517 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 SYNPO2Q9UMS6 1093 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 GREB1LQ9C091 1923 aaPredicted RBP11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 RAD50Q92878 1312 aa11.85□□□□□ -0.51
SCAMP3-206ENST00000478737 ORC4O43929 436 aa11.84□□□□□ -0.51
SCAMP3-206ENST00000478737 HOXD10P28358 340 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms