RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CXCL11O14625 94 aa8.21□□□□□ -1.1
BRCA1-215ENST00000478531 ALDH1A1P00352 501 aa8.21□□□□□ -1.1
BRCA1-215ENST00000478531 FGAP02671 866 aa8.21□□□□□ -1.1
BRCA1-215ENST00000478531 SLC3A2P08195 630 aaKnown RBP8.21□□□□□ -1.1
BRCA1-215ENST00000478531 PDE4BQ07343 736 aa8.21□□□□□ -1.1
BRCA1-215ENST00000478531 TAF1CQ15572 869 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-215ENST00000478531 TOMM22Q9NS69 142 aa8.21□□□□□ -1.1
BRCA1-215ENST00000478531 ZSWIM8A7E2V4 1837 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 TESPA1A2RU30 521 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-215ENST00000478531 PDHXO00330 501 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 RASA1P20936 1047 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 GUCY1A2P33402 732 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 ATP2B2Q01814 1243 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 ICA1Q05084 483 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 CRHR2Q13324 411 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 TREML2Q5T2D2 321 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 TMEM179Q6ZVK1 233 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 TBC1D2Q9BYX2 928 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 R3HDMLQ9H3Y0 253 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 ZNF287Q9HBT7 754 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 GINM1Q9NU53 330 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 TMOD4Q9NZQ9 345 aa8.2□□□□□ -1.1
BRCA1-215ENST00000478531 ZMYM6O95789 1325 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 USP17L10C9JJH3 530 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 RAD21O60216 631 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 CAPN15O75808 1086 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 BACE1P56817 501 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 MOGSQ13724 837 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 ALX1Q15699 326 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 RRP12Q5JTH9 1297 aaKnown RBP8.19□□□□□ -1.1
BRCA1-215ENST00000478531 FASTKD5Q7L8L6 764 aaKnown RBP8.19□□□□□ -1.1
BRCA1-215ENST00000478531 ZNF444Q8N0Y2 327 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-215ENST00000478531 ACER1Q8TDN7 264 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 WDR18Q9BV38 432 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 INCENPQ9NQS7 918 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 BRCA2P51587 3418 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 SGSM2O43147 1006 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 TSPY3P0CV98 308 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 TSPY8P0CW00 308 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 CYP2C8P10632 490 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 FAM47AQ5JRC9 791 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 ANKRD23Q86SG2 305 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 PROCA1Q8NCQ7 364 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-215ENST00000478531 CCDC17Q96LX7 622 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 DSCC1Q9BVC3 393 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 AGTPBP1Q9UPW5 1226 aa8.19□□□□□ -1.1
BRCA1-215ENST00000478531 TSPY2A6NKD2 308 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 RANBP6O60518 1105 aaKnown RBP8.18□□□□□ -1.1
BRCA1-215ENST00000478531 CDC45O75419 566 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 ECM2O94769 699 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-215ENST00000478531 PTH1RQ03431 593 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 GPAT2Q6NUI2 795 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 CASC1Q6TDU7 716 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 TBC1D10CQ8IV04 446 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 PARK7Q99497 189 aaKnown RBP8.18□□□□□ -1.1
BRCA1-215ENST00000478531 ZFYVE28Q9HCC9 887 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 ARHGEF10LQ9HCE6 1279 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 MGAMO43451 1857 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 PARP14Q460N5 1801 aa8.18□□□□□ -1.1
BRCA1-215ENST00000478531 A0A1W2PRG0 241 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 C19orf81C9J6K1 198 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 GPR25O00155 361 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 ZNF213O14771 459 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 EEF2P13639 858 aaKnown RBP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 USP14P54578 494 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 TFAP4Q01664 338 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 IMMTQ16891 758 aaKnown RBP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 USP17L2Q6R6M4 530 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 MFSD6Q6ZSS7 791 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 SPICE1Q8N0Z3 855 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 SMCR8Q8TEV9 937 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 ZNF296Q8WUU4 475 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 ESYT1Q9BSJ8 1104 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 NBPF3Q9H094 633 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 KANSL2Q9H9L4 492 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 ANO2Q9NQ90 1003 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 ANAPC4Q9UJX5 808 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 NEDD4P46934 1319 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 COL11A1P12107 1806 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 VCAM1P19320 739 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 IRX3P78415 501 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 PABPC4Q13310 644 aaKnown RBP eCLIP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 SH3D19Q5HYK7 790 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 AKNAD1Q5T1N1 836 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 CEP95Q96GE4 821 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 CFHR5Q9BXR6 569 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 KIAA1683Q9H0B3 1180 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 SH2D4AQ9H788 454 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 ZCCHC17Q9NP64 241 aaKnown RBP8.17□□□□□ -1.1
BRCA1-215ENST00000478531 EMILIN3Q9NT22 766 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 CPA4Q9UI42 421 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 CTNNA3Q9UI47 895 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 PNMA3Q9UL41 463 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 PLIN4Q96Q06 1357 aa8.17□□□□□ -1.1
BRCA1-215ENST00000478531 ORC4O43929 436 aa8.16□□□□□ -1.1
BRCA1-215ENST00000478531 NMT2O60551 498 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms