RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 IVNS1ABPQ9Y6Y0 642 aa13.65□□□□□ -0.22
PCCB-214ENST00000478469 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
PCCB-214ENST00000478469 ECM2O94769 699 aaPredicted RBP13.64□□□□□ -0.23
PCCB-214ENST00000478469 CUL4AQ13619 759 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 ASPRV1Q53RT3 343 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 DGKHQ86XP1 1220 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 LEO1Q8WVC0 666 aaPredicted RBP13.64□□□□□ -0.23
PCCB-214ENST00000478469 MTFR1LQ9H019 292 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 SRGNP10124 158 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 LRSAM1Q6UWE0 723 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 MIGA2Q7L4E1 593 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 DEF6Q9H4E7 631 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 LRRC4BQ9NT99 713 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 ZNF609O15014 1411 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 TBC1D10BQ4KMP7 808 aaPredicted RBP13.64□□□□□ -0.23
PCCB-214ENST00000478469 TBC1D10CQ8IV04 446 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 SPICE1Q8N0Z3 855 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 RNF181Q9P0P0 153 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
PCCB-214ENST00000478469 FAM160A1Q05DH4 1040 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 FKBP15Q5T1M5 1219 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 BLIDQ8IZY5 108 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
PCCB-214ENST00000478469 SMCR8Q8TEV9 937 aaPredicted RBP13.63□□□□□ -0.23
PCCB-214ENST00000478469 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 NSUN7Q8NE18 718 aaKnown RBP13.63□□□□□ -0.23
PCCB-214ENST00000478469 TTC14Q96N46 770 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 BTBD18B2RXH4 712 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 TXKP42681 527 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 FBXO11Q86XK2 927 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 LUC7LQ9NQ29 371 aaKnown RBP13.63□□□□□ -0.23
PCCB-214ENST00000478469 GPHNQ9NQX3 736 aaPredicted RBP13.63□□□□□ -0.23
PCCB-214ENST00000478469 FLOT1O75955 427 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 YEATS4O95619 227 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 IFNAR1P17181 557 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 SYCP3Q8IZU3 236 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
PCCB-214ENST00000478469 PEAK1Q9H792 1746 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 ELP1O95163 1332 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 LIG1P18858 919 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 POLRMTO00411 1230 aaKnown RBP13.62□□□□□ -0.23
PCCB-214ENST00000478469 CUTAO60888 179 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 PLCD1P51178 756 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.231e-9■■■■□ 25.5
PCCB-214ENST00000478469 PLIN2Q99541 437 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 CCP110O43303 1012 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 MTIF2P46199 727 aaKnown RBP13.62□□□□□ -0.23
PCCB-214ENST00000478469 SP4Q02446 784 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 PKD2L1Q9P0L9 805 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 PCDHA1Q9Y5I3 950 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 CHGBP05060 677 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 ASNSP08243 561 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 NOM1Q5C9Z4 860 aaKnown RBP13.62□□□□□ -0.23
PCCB-214ENST00000478469 GALNT17Q6IS24 598 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 CTR9Q6PD62 1173 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 FAM43AQ8N2R8 423 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 TRIM47Q96LD4 638 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
PCCB-214ENST00000478469 KCNH3Q9ULD8 1083 aa13.62□□□□□ -0.23
PCCB-214ENST00000478469 PSMA7O14818 248 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 BACH1O14867 736 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 ALAS1P13196 640 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 TMEM179Q6ZVK1 233 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 SLC44A5Q8NCS7 719 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 INCENPQ9NQS7 918 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 PNMA2Q9UL42 364 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 MRPL11Q9Y3B7 192 aaKnown RBP13.61□□□□□ -0.23
PCCB-214ENST00000478469 DAGLAQ9Y4D2 1042 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 MYCLP12524 364 aaPredicted RBP13.61□□□□□ -0.23
PCCB-214ENST00000478469 PKP1Q13835 747 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 CCDC70Q6NSX1 233 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 AMNQ9BXJ7 453 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.23
PCCB-214ENST00000478469 PABPC4Q13310 644 aaKnown RBP eCLIP13.61□□□□□ -0.23
PCCB-214ENST00000478469 ANO6Q4KMQ2 910 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 USP17L2Q6R6M4 530 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 FERMT2Q96AC1 680 aa13.61□□□□□ -0.23
PCCB-214ENST00000478469 BMP3P12645 472 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
PCCB-214ENST00000478469 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
PCCB-214ENST00000478469 MTA3Q9BTC8 594 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 LARGE1O95461 756 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 GH2P01242 217 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 DDR1Q08345 913 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 TCERG1LQ5VWI1 586 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 KCTD1Q719H9 257 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 USP28Q96RU2 1077 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 ZBTB21Q9ULJ3 1066 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 FGFR2P21802 821 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 KLRK1P26718 216 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 ODF2Q5BJF6 829 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 HAUS3Q68CZ6 603 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 NEDD4P46934 1319 aa13.6□□□□□ -0.23
PCCB-214ENST00000478469 FMNL1O95466 1100 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms