RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PDE4BQ07343 736 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 MPP2Q14168 576 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 NBPF9Q3BBW0 867 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 ZNF394Q53GI3 561 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 FBXL19Q6PCT2 694 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 SEZ6L2Q6UXD5 910 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 ZAR1Q86SH2 424 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 METTL16Q86W50 562 aaKnown RBP4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.47□□□□□ -1.693e-7■□□□□ 9.1
FNDC3B-209ENST00000478016 SCYL1Q96KG9 808 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 TBC1D32Q96NH3 1257 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 LGR6Q9HBX8 967 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 ADAMTS1Q9UHI8 967 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 PNMA2Q9UL42 364 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 SBNO2Q9Y2G9 1366 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 ROBO2Q9HCK4 1378 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 CFAP69A5D8W1 941 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 GOLIM4O00461 696 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 EPB41L2O43491 1005 aaKnown RBP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 GREM1O60565 184 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 BDNFP23560 247 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 PAX3P23760 479 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 ITGB7P26010 798 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 GRK4P32298 578 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 GYS2P54840 703 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 RHBDL3P58872 404 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 HDLBPQ00341 1268 aaKnown RBP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 CYP27A1Q02318 531 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 CPSF6Q16630 551 aaKnown RBP eCLIP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 CWF19L2Q2TBE0 894 aaKnown RBP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 HSP90AB2PQ58FF8 381 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 EGFLAMQ63HQ2 1017 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 DPH6Q7L8W6 267 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 REC114Q7Z4M0 266 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 PCGF5Q86SE9 256 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 NT5DC4Q86YG4 428 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 KIAA0825Q8IV33 1275 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 HID1Q8IV36 788 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 FBXL6Q8N531 539 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 SHKBP1Q8TBC3 707 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 ANP32BQ92688 251 aaKnown RBP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 SPON2Q9BUD6 331 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 METTL22Q9BUU2 404 aaPredicted RBP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 LRRC3Q9BY71 257 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 C1GALT1Q9NS00 363 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 ATG3Q9NT62 314 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 GNL3LQ9NVN8 582 aaKnown RBP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 BSDC1Q9NW68 430 aaPredicted RBP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 DDX41Q9UJV9 622 aaKnown RBP4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 PCDHGB7Q9Y5F8 929 aa4.46□□□□□ -1.7
FNDC3B-209ENST00000478016 WDR64B1ANS9 1081 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 TLR3O15455 904 aaKnown RBP4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 F13BP05160 661 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 PGRP06401 933 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 ADMP35318 185 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 APOBRQ0VD83 1088 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 CDK5R2Q13319 367 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 HDAC1Q13547 482 aaPredicted RBP4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 NAALADL2Q58DX5 795 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 C9orf131Q5VYM1 1079 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 DUSP27Q5VZP5 1158 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 ZNF280DQ6N043 979 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 ZDHHC13Q8IUH4 622 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 EGFL6Q8IUX8 553 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 ZNF654Q8IZM8 581 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 MSL3Q8N5Y2 521 aaKnown RBP4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 FBXO27Q8NI29 283 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 GATA6Q92908 595 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 SWAP70Q9UH65 585 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 ADAM30Q9UKF2 790 aa4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 TMA7Q9Y2S6 64 aaKnown RBP4.45□□□□□ -1.7
FNDC3B-209ENST00000478016 TLDC2A0PJX2 215 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 FAM170BA6NMN3 283 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 LRIG2O94898 1065 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 FAM87AP0C7U9 286 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 CAP2P40123 477 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 CRKP46108 304 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 RACK1P63244 317 aaKnown RBP4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 IGBP1P78318 339 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 PTPROQ16827 1216 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 CYP27C1Q4G0S4 372 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 OGFOD3Q6PK18 319 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 DDX46Q7L014 1031 aaKnown RBP4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 ARMCX6Q7L4S7 300 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 UBE3DQ7Z6J8 389 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 PSMG3-AS1Q96PY0 264 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 NT5C1AQ9BXI3 368 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 OSBPL1AQ9BXW6 950 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 FBRSQ9HAH7 460 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 UBP1Q9NZI7 540 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 CHPF2Q9P2E5 772 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 RNF112Q9ULX5 631 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 HDAC5Q9UQL6 1122 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 LEMD3Q9Y2U8 911 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 RPGRIP1LQ68CZ1 1315 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 PRR36Q9H6K5 1346 aa4.44□□□□□ -1.7
FNDC3B-209ENST00000478016 GRIN3BO60391 1043 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 HTR3BO95264 441 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 CST3P01034 146 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms