RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 STK11IPQ8N1F8 1099 aa12.33□□□□□ -0.44
LCLAT1-209ENST00000478015 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
LCLAT1-209ENST00000478015 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
LCLAT1-209ENST00000478015 RNF113AO15541 343 aaKnown RBP12.32□□□□□ -0.44
LCLAT1-209ENST00000478015 ELNP15502 786 aa12.32□□□□□ -0.44
LCLAT1-209ENST00000478015 CDK8P49336 464 aa12.32□□□□□ -0.44
LCLAT1-209ENST00000478015 AS3MTQ9HBK9 375 aa12.32□□□□□ -0.44
LCLAT1-209ENST00000478015 MYPNQ86TC9 1320 aa12.32□□□□□ -0.44
LCLAT1-209ENST00000478015 C19orf81C9J6K1 198 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 GPAA1O43292 621 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 CNMDO75829 334 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 VCAM1P19320 739 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 HERVK_113P62684 666 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 KIF22Q14807 665 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 FAM110CQ1W6H9 321 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 LNPKQ9C0E8 428 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 PORCNQ9H237 461 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 GJD2Q9UKL4 321 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 TTC41PQ6P2S7 1318 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 GREB1LQ9C091 1923 aaPredicted RBP12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 PDE1AP54750 535 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 C16orf86Q6ZW13 317 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 SMC5Q8IY18 1101 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 APPBP2Q92624 585 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 C12orf42Q96LP6 360 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 KIAA1683Q9H0B3 1180 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 TACC3Q9Y6A5 838 aa12.31□□□□□ -0.44
LCLAT1-209ENST00000478015 MPHOSPH10O00566 681 aaKnown RBP12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 GNRH1P01148 92 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 FCGRTP55899 365 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 TRIM32Q13049 653 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 SHISA4Q96DD7 197 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 TMOD4Q9NZQ9 345 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 STAP2Q9UGK3 403 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 PARP14Q460N5 1801 aa12.3□□□□□ -0.44
LCLAT1-209ENST00000478015 TNPO2O14787 897 aaKnown RBP12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 GLRX3O76003 335 aaKnown RBP12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 GRK4P32298 578 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 VPS53Q5VIR6 699 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 SPICE1Q8N0Z3 855 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 INCENPQ9NQS7 918 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 BTBD7Q9P203 1132 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 ZMYM1Q5SVZ6 1142 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 USP17L2Q6R6M4 530 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 CATSPERGQ6ZRH7 1159 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 RAET1EQ8TD07 263 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 GPATCH3Q96I76 525 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 FEZ1Q99689 392 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
LCLAT1-209ENST00000478015 PRDM1O75626 825 aa12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 RASA1P20936 1047 aa12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 GCLCP48506 637 aaPredicted RBP12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 NKX2-3Q8TAU0 364 aa12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 FAM227BQ96M60 508 aa12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 PAGR1Q9BTK6 254 aa12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 RPAP3Q9H6T3 665 aaPredicted RBP12.28□□□□□ -0.44
LCLAT1-209ENST00000478015 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.44
LCLAT1-209ENST00000478015 MINDY4BA8MYZ0 360 aa12.27□□□□□ -0.44
LCLAT1-209ENST00000478015 ADCY3O60266 1144 aa12.27□□□□□ -0.44
LCLAT1-209ENST00000478015 ARHGEF6Q15052 776 aa12.27□□□□□ -0.44
LCLAT1-209ENST00000478015 SBK1Q52WX2 424 aa12.27□□□□□ -0.44
LCLAT1-209ENST00000478015 TMEM179Q6ZVK1 233 aa12.27□□□□□ -0.44
LCLAT1-209ENST00000478015 IFNL3Q8IZI9 196 aa12.27□□□□□ -0.44
LCLAT1-209ENST00000478015 CABP5Q9NP86 173 aa12.27□□□□□ -0.44
LCLAT1-209ENST00000478015 ERC2O15083 957 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 CCL5P13501 91 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 EEF2P13639 858 aaKnown RBP12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 PRMT2P55345 433 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 ERVK-9P63128 1117 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 ERVK-24P63145 666 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 NBPF11Q86T75 865 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 PLEKHM2Q8IWE5 1019 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 SWAP70Q9UH65 585 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 TAOK2Q9UL54 1235 aa12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 COL11A1P12107 1806 aaPredicted RBP12.27□□□□□ -0.45
LCLAT1-209ENST00000478015 A0A0D9SFI3 127 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L15C9J2P7 530 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 PATL2C9JE40 543 aaKnown RBP12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L13C9JLJ4 530 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L11C9JVI0 530 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L18D6R9N7 530 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L22D6RA61 530 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L17D6RBQ6 530 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L19D6RCP7 530 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L20D6RJB6 530 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 ZFYP08048 801 aaPredicted RBP12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 HOXD10P28358 340 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 NUCB1Q02818 461 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 ICA1Q05084 483 aa12.26□□□□□ -0.45
LCLAT1-209ENST00000478015 USP17L24Q0WX57 530 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms