RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 DNAJB8Q8NHS0 232 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 XAGE3Q8WTP9 111 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 GPRASP2Q96D09 838 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 TNKS2Q9H2K2 1166 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 KLHL3Q9UH77 587 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 ZNRF3Q9ULT6 936 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 TPX2Q9ULW0 747 aaKnown RBP7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 CEP131Q9UPN4 1083 aa7.32□□□□□ -1.24
SMNDC1-205ENST00000477763 GNAT3A8MTJ3 354 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 CHURC1-FNTBB4DL54 471 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 ZNF865P0CJ78 1059 aaPredicted RBP7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 IFI16Q16666 785 aaKnown RBP7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 NAALADL2Q58DX5 795 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 CDCP2Q5VXM1 449 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 FAM181AQ8N9Y4 354 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 RIN3Q8TB24 985 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 PPP1R13LQ8WUF5 828 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 CCDC74BQ96LY2 380 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 ACBD3Q9H3P7 528 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 INPP5FQ9Y2H2 1132 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 U3KQE9 123 aa7.31□□□□□ -1.24
SMNDC1-205ENST00000477763 TMEM265A0A087WTH1 108 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 KIR3DL1P43629 444 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 SOX9P48436 509 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 CDH24Q86UP0 819 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 VSIG10LQ86VR7 867 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 VPS37DQ86XT2 251 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 STK11IPQ8N1F8 1099 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 PLD6Q8N2A8 252 aaKnown RBP7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 TMEM40Q8WWA1 233 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 CNNM2Q9H8M5 875 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 CAPN10Q9HC96 672 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 SNX11Q9Y5W9 270 aa7.3□□□□□ -1.24
SMNDC1-205ENST00000477763 RGS13O14921 159 aa7.29□□□□□ -1.24
SMNDC1-205ENST00000477763 CCNFP41002 786 aa7.29□□□□□ -1.24
SMNDC1-205ENST00000477763 OVOS1Q6IE37 1185 aa7.29□□□□□ -1.24
SMNDC1-205ENST00000477763 CCDC39Q9UFE4 941 aa7.29□□□□□ -1.24
SMNDC1-205ENST00000477763 VAV3Q9UKW4 847 aa7.29□□□□□ -1.24
SMNDC1-205ENST00000477763 PLAGL2Q9UPG8 496 aa7.29□□□□□ -1.24
SMNDC1-205ENST00000477763 CNTNAP4Q9C0A0 1308 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 WNT11O96014 354 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 RAG1P15918 1043 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 CLCN7P51798 805 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 PRKCQQ04759 706 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 NKPD1Q17RQ9 610 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 ARSHQ5FYA8 562 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 NLRC3Q7RTR2 1065 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 SPACA3Q8IXA5 215 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 PHACTR4Q8IZ21 702 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 MFSD4AQ8N468 514 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 RBBP8NLQ8NC74 664 aaPredicted RBP7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 ATG4CQ96DT6 458 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 SEC16BQ96JE7 1060 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 FERD3LQ96RJ6 166 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 GINM1Q9NU53 330 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 CAPN6Q9Y6Q1 641 aa7.28□□□□□ -1.24
SMNDC1-205ENST00000477763 TNFRSF10CO14798 259 aa7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 ITIH2P19823 946 aa7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 INTS3Q68E01 1043 aaKnown RBP7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 MCTP1Q6DN14 999 aa7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 TAB3Q8N5C8 712 aaPredicted RBP7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 SLC43A3Q8NBI5 491 aa7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 PIWIL2Q8TC59 973 aaKnown RBP7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 RNF141Q8WVD5 230 aa7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 FBXL18Q96ME1 805 aa7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 KIF2CQ99661 725 aa7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 ANGEL1Q9UNK9 670 aaKnown RBP7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 EFR3BQ9Y2G0 817 aa7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 COL17A1Q9UMD9 1497 aaPredicted RBP7.27□□□□□ -1.25
SMNDC1-205ENST00000477763 PRR33A8MZF0 331 aa7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 NME1P15531 152 aaKnown RBP7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 TNNI2P48788 182 aa7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 BAHD1Q8TBE0 780 aaPredicted RBP7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 BCL7CQ8WUZ0 217 aaPredicted RBP7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 HRASLS5Q96KN8 279 aa7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 ASPNQ9BXN1 380 aa7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 SLC5A6Q9Y289 635 aa7.26□□□□□ -1.25
SMNDC1-205ENST00000477763 FAM155AB1AL88 458 aaPredicted RBP7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 ADAMTS4O75173 837 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 UBOX5O94941 541 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 GBP1P32455 592 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 SF3A1Q15459 793 aaKnown RBP7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 ASB11Q8WXH4 323 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 KREMEN1Q96MU8 473 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 TM9SF2Q99805 663 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 TINF2Q9BSI4 451 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 ANTXR1Q9H6X2 564 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 STRIP2Q9ULQ0 834 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 PPT2Q9UMR5 302 aa7.25□□□□□ -1.25
SMNDC1-205ENST00000477763 CBX7O95931 251 aa7.24□□□□□ -1.25
SMNDC1-205ENST00000477763 ARID5AQ03989 594 aa7.24□□□□□ -1.25
SMNDC1-205ENST00000477763 NFXL1Q6ZNB6 911 aa7.24□□□□□ -1.25
SMNDC1-205ENST00000477763 THAP5Q7Z6K1 395 aa7.24□□□□□ -1.25
SMNDC1-205ENST00000477763 OR6P1Q8NGX9 317 aa7.24□□□□□ -1.25
SMNDC1-205ENST00000477763 SREK1Q8WXA9 508 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms