RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 EPB41L4AQ9HCS5 686 aaPredicted RBP11.69□□□□□ -0.54
NIFK-205ENST00000477693 ROBO3Q96MS0 1386 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 TRIM75PA6NK02 468 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 GPR25O00155 361 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 GH2P01242 217 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 CRHR2Q13324 411 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 SH3D19Q5HYK7 790 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 C16orf86Q6ZW13 317 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 SLC45A1Q9Y2W3 748 aa11.68□□□□□ -0.54
NIFK-205ENST00000477693 CASP8AP2Q9UKL3 1982 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 PTPRFP10586 1907 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 BAZ2AQ9UIF9 1905 aaKnown RBP11.67□□□□□ -0.54
NIFK-205ENST00000477693 CYP2D7A0A087X1C5 515 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 A0A0D9SFI3 127 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 FOXP2O15409 715 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 REC8O95072 547 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 SPP2Q13103 211 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 TAF1CQ15572 869 aaPredicted RBP11.67□□□□□ -0.54
NIFK-205ENST00000477693 ABCB5Q2M3G0 1257 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 C8orf34Q49A92 452 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 GPAT2Q6NUI2 795 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 IFNL3Q8IZI9 196 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 PROCA1Q8NCQ7 364 aaPredicted RBP11.67□□□□□ -0.54
NIFK-205ENST00000477693 SLC44A5Q8NCS7 719 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 ZNF296Q8WUU4 475 aaPredicted RBP11.67□□□□□ -0.54
NIFK-205ENST00000477693 DYNLL2Q96FJ2 89 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 NACAP1Q9BZK3 213 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 ZFYVE28Q9HCC9 887 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 CABP5Q9NP86 173 aa11.67□□□□□ -0.54
NIFK-205ENST00000477693 USP17L10C9JJH3 530 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 SMIM22K7EJ46 135 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 PDHXO00330 501 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 TLR2O60603 784 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 APPP05067 770 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 GUCY1A2P33402 732 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 TDO2P48775 406 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 CDK8P49336 464 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 BACE1P56817 501 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
NIFK-205ENST00000477693 MTMR2Q13614 643 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 CCDC17Q96LX7 622 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 NAPBQ9H115 298 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 LOC285556D6RIA3 1793 aa11.66□□□□□ -0.54
NIFK-205ENST00000477693 RAD50Q92878 1312 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 ADGRA2Q96PE1 1338 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 C19orf81C9J6K1 198 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 FKTNO75072 461 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 CHMLP26374 656 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 HMGCS2P54868 508 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.54
NIFK-205ENST00000477693 RAB3GAP1Q15042 981 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 GADL1Q6ZQY3 521 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 TMEM179Q6ZVK1 233 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 ZNF589Q86UQ0 364 aaPredicted RBP11.65□□□□□ -0.54
NIFK-205ENST00000477693 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 PARK7Q99497 189 aaKnown RBP11.65□□□□□ -0.54
NIFK-205ENST00000477693 MCOLN1Q9GZU1 580 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 DIAPH3Q9NSV4 1193 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
NIFK-205ENST00000477693 ZMYM6O95789 1325 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 MINDY4BA8MYZ0 360 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 MPHOSPH10O00566 681 aaKnown RBP11.64□□□□□ -0.55
NIFK-205ENST00000477693 HSPD1P10809 573 aaKnown RBP11.64□□□□□ -0.55
NIFK-205ENST00000477693 AKR1B1P15121 316 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 SEPT2Q15019 361 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 ALX1Q15699 326 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 TREML2Q5T2D2 321 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 VPS53Q5VIR6 699 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
NIFK-205ENST00000477693 C17orf99Q6UX52 265 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 C12orf42Q96LP6 360 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
NIFK-205ENST00000477693 USP14P54578 494 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 SP3Q02447 781 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.55
NIFK-205ENST00000477693 DGKZQ13574 1117 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 USP17L2Q6R6M4 530 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 CWC27Q6UX04 472 aaKnown RBP11.63□□□□□ -0.55
NIFK-205ENST00000477693 KIAA1211Q6ZU35 1233 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 CTU1Q7Z7A3 348 aaKnown RBP11.63□□□□□ -0.55
NIFK-205ENST00000477693 KIAA1683Q9H0B3 1180 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 ZNF287Q9HBT7 754 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 TMOD4Q9NZQ9 345 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 ANAPC4Q9UJX5 808 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
NIFK-205ENST00000477693 FGAP02671 866 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 SLC3A2P08195 630 aaKnown RBP11.62□□□□□ -0.55
NIFK-205ENST00000477693 CYP2C8P10632 490 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 RASA1P20936 1047 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 HOXA7P31268 230 aaPredicted RBP11.62□□□□□ -0.55
NIFK-205ENST00000477693 ICA1Q05084 483 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 PPARAQ07869 468 aa11.62□□□□□ -0.55
NIFK-205ENST00000477693 ACER1Q8TDN7 264 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms