RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TACC3Q9Y6A5 838 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 CHD4Q14839 1912 aa9.19□□□□□ -0.94
VMA21-203ENST00000477649 SYCE3A1L190 88 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 PPP6R2O75170 966 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 LAMB1P07942 1786 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 TSPY3P0CV98 308 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 TSPY8P0CW00 308 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 CCDC192P0DO97 292 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 RHBDL3P58872 404 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 CCDC173Q0VFZ6 552 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 SF3A1Q15459 793 aaKnown RBP9.18□□□□□ -0.94
VMA21-203ENST00000477649 DIXDC1Q155Q3 683 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 RILPL1Q5EBL4 403 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 ADALQ6DHV7 355 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 CCDC73Q6ZRK6 1079 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 C10orf71Q711Q0 1435 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 BICD2Q8TD16 824 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 NUP133Q8WUM0 1156 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 ZDHHC15Q96MV8 337 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 NUP62CLQ9H1M0 184 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 KAT14Q9H8E8 782 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 INCENPQ9NQS7 918 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 TFIP11Q9UBB9 837 aaKnown RBP9.18□□□□□ -0.94
VMA21-203ENST00000477649 CEP131Q9UPN4 1083 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 DAGLAQ9Y4D2 1042 aa9.18□□□□□ -0.94
VMA21-203ENST00000477649 PLIN4Q96Q06 1357 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 FLT1P17948 1338 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 USP17L3A6NCW0 530 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 USP17L4A6NCW7 530 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 RIMBP2O15034 1052 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 MMP1P03956 469 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 USP17L8P0C7I0 530 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 HOXB3P14651 431 aaPredicted RBP9.17□□□□□ -0.94
VMA21-203ENST00000477649 HOXB1P14653 301 aaPredicted RBP9.17□□□□□ -0.94
VMA21-203ENST00000477649 NOVP48745 357 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 NUBP1P53384 320 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 TFAP4Q01664 338 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 KIAA2012Q0VF49 1180 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 STK38Q15208 465 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 MAP3K11Q16584 847 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 ANO1Q5XXA6 986 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 GALNT17Q6IS24 598 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 RBM43Q6ZSC3 357 aaKnown RBP9.17□□□□□ -0.94
VMA21-203ENST00000477649 TMTC3Q6ZXV5 915 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 USP17L1Q7RTZ2 530 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 NBPF11Q86T75 865 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 GAS2L3Q86XJ1 694 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 LINC00301Q8NCQ3 95 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 NEDD1Q8NHV4 660 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 C7orf43Q8WVR3 580 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 CHAMP1Q96JM3 812 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 USP28Q96RU2 1077 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 PSMD1Q99460 953 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 ZKSCAN3Q9BRR0 538 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 EHD4Q9H223 541 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 DHX36Q9H2U1 1008 aaKnown RBP9.17□□□□□ -0.94
VMA21-203ENST00000477649 SENP2Q9HC62 589 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 ANO8Q9HCE9 1232 aaPredicted RBP9.17□□□□□ -0.94
VMA21-203ENST00000477649 SH3GLB2Q9NR46 395 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.17□□□□□ -0.94
VMA21-203ENST00000477649 SERPINA10Q9UK55 444 aa9.17□□□□□ -0.94
VMA21-203ENST00000477649 TTF2Q9UNY4 1162 aaKnown RBP9.17□□□□□ -0.94
VMA21-203ENST00000477649 CYP2D7A0A087X1C5 515 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 SPTLC2O15270 562 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 HLA-DOAP06340 250 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 CALML3P27482 149 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 ME1P48163 572 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 CDK8P49336 464 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 FAM160A1Q05DH4 1040 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 FUT2Q10981 343 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 SLC39A14Q15043 492 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 CCDC93Q567U6 631 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 MSL1Q68DK7 614 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 FAM173BQ6P4H8 233 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 NOSTRINQ8IVI9 506 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 TTLL6Q8N841 843 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 PHKBQ93100 1093 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 CCDC17Q96LX7 622 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 GPR101Q96P66 508 aaPredicted RBP9.16□□□□□ -0.94
VMA21-203ENST00000477649 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.16□□□□□ -0.94
VMA21-203ENST00000477649 CLSTN2Q9H4D0 955 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 JAG2Q9Y219 1238 aa9.16□□□□□ -0.94
VMA21-203ENST00000477649 DLEC1Q9Y238 1755 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 COL11A2P13942 1736 aaPredicted RBP9.15□□□□□ -0.94
VMA21-203ENST00000477649 KINO60870 393 aaKnown RBP9.15□□□□□ -0.94
VMA21-203ENST00000477649 PRDM1O75626 825 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 CYP2D6P10635 497 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 TOP1P11387 765 aaKnown RBP9.15□□□□□ -0.94
VMA21-203ENST00000477649 RXRAP19793 462 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 RASA1P20936 1047 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 CMA1P23946 247 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 TRAPPC10P48553 1259 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 TGFB2P61812 414 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 GUCY1B3Q02153 619 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 GRM4Q14833 912 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 GRIK5Q16478 980 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 HS1BP3Q53T59 392 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 MAPKAPK5Q8IW41 473 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 CCDC144CPQ8IYA2 1237 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 ELOA2Q8IYF1 753 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms