RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 NGDNQ8NEJ9 315 aaKnown RBP7.25□□□□□ -1.25
VPS45-207ENST00000477558 BCL9LQ86UU0 1499 aa7.25□□□□□ -1.25
VPS45-207ENST00000477558 TTC21AQ8NDW8 1320 aa7.24□□□□□ -1.25
VPS45-207ENST00000477558 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.24□□□□□ -1.25
VPS45-207ENST00000477558 FBXO24O75426 580 aa7.24□□□□□ -1.25
VPS45-207ENST00000477558 XRCC5P13010 732 aaKnown RBP7.24□□□□□ -1.25
VPS45-207ENST00000477558 PRRT3Q5FWE3 981 aa7.24□□□□□ -1.25
VPS45-207ENST00000477558 SLC12A5Q9H2X9 1139 aa7.24□□□□□ -1.25
VPS45-207ENST00000477558 SEC31BQ9NQW1 1179 aa7.24□□□□□ -1.25
VPS45-207ENST00000477558 VTI1BQ9UEU0 232 aa7.24□□□□□ -1.25
VPS45-207ENST00000477558 ATRNO75882 1429 aa7.24□□□□□ -1.25
VPS45-207ENST00000477558 KTN1Q86UP2 1357 aaKnown RBP7.23□□□□□ -1.25
VPS45-207ENST00000477558 TTC21BQ7Z4L5 1316 aa7.23□□□□□ -1.25
VPS45-207ENST00000477558 CDK12Q9NYV4 1490 aaPredicted RBP7.23□□□□□ -1.25
VPS45-207ENST00000477558 LTN1O94822 1766 aa7.23□□□□□ -1.25
VPS45-207ENST00000477558 DLL1O00548 723 aa7.23□□□□□ -1.25
VPS45-207ENST00000477558 FURINP09958 794 aa7.23□□□□□ -1.25
VPS45-207ENST00000477558 C19orf57Q0VDD7 668 aa7.23□□□□□ -1.25
VPS45-207ENST00000477558 MRPL58Q14197 206 aaKnown RBP7.23□□□□□ -1.25
VPS45-207ENST00000477558 FOXD4L6Q3SYB3 417 aaPredicted RBP7.23□□□□□ -1.25
VPS45-207ENST00000477558 MEI1Q5TIA1 1274 aa7.23□□□□□ -1.25
VPS45-207ENST00000477558 FOXD4L3Q6VB84 417 aaPredicted RBP7.23□□□□□ -1.25
VPS45-207ENST00000477558 MRS2Q9HD23 443 aa7.23□□□□□ -1.25
VPS45-207ENST00000477558 GLI3P10071 1580 aa7.23□□□□□ -1.25
VPS45-207ENST00000477558 ADAM11O75078 769 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 B3GALT4O96024 378 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 SPATA31C1P0DKV0 1188 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 ELNP15502 786 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 SELPP16109 830 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 CD68P34810 354 aaPredicted RBP7.22□□□□□ -1.25
VPS45-207ENST00000477558 NLRP12P59046 1061 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 GSTM4Q03013 218 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 RPS26P11Q5JNZ5 115 aaPredicted RBP7.22□□□□□ -1.25
VPS45-207ENST00000477558 TPTE2Q6XPS3 522 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 MAP4K3Q8IVH8 894 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 KLHL23Q8NBE8 558 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 OSGEPQ9NPF4 335 aa7.22□□□□□ -1.25
VPS45-207ENST00000477558 WNK3Q9BYP7 1800 aa7.21□□□□□ -1.25
VPS45-207ENST00000477558 THSD7AQ9UPZ6 1657 aa7.21□□□□□ -1.25
VPS45-207ENST00000477558 CAMTA1Q9Y6Y1 1673 aa7.21□□□□□ -1.25
VPS45-207ENST00000477558 ARL4DP49703 201 aa7.21□□□□□ -1.25
VPS45-207ENST00000477558 LDLRAD1Q5T700 205 aa7.21□□□□□ -1.25
VPS45-207ENST00000477558 WNT8BQ93098 351 aa7.21□□□□□ -1.25
VPS45-207ENST00000477558 ZFYVE1Q9HBF4 777 aa7.21□□□□□ -1.25
VPS45-207ENST00000477558 SRA1Q9HD15 236 aaKnown RBP7.21□□□□□ -1.25
VPS45-207ENST00000477558 TERF2IPQ9NYB0 399 aa7.21□□□□□ -1.25
VPS45-207ENST00000477558 GPN3Q9UHW5 284 aaPredicted RBP7.21□□□□□ -1.25
VPS45-207ENST00000477558 KIF7Q2M1P5 1343 aa7.21□□□□□ -1.26
VPS45-207ENST00000477558 WISP1O95388 367 aa7.2□□□□□ -1.26
VPS45-207ENST00000477558 IGF2-ASQ6U949 168 aa7.2□□□□□ -1.26
VPS45-207ENST00000477558 MRRFQ96E11 262 aaKnown RBP7.2□□□□□ -1.26
VPS45-207ENST00000477558 NECAB3Q96P71 396 aaPredicted RBP7.2□□□□□ -1.26
VPS45-207ENST00000477558 TRIM56Q9BRZ2 755 aaKnown RBP7.2□□□□□ -1.26
VPS45-207ENST00000477558 SOX17Q9H6I2 414 aaPredicted RBP7.2□□□□□ -1.26
VPS45-207ENST00000477558 KIAA1522Q9P206 1035 aaPredicted RBP7.2□□□□□ -1.26
VPS45-207ENST00000477558 KIAA0232Q92628 1395 aa7.2□□□□□ -1.26
VPS45-207ENST00000477558 CCDC7Q96M83 1385 aa7.2□□□□□ -1.26
VPS45-207ENST00000477558 FAM208AQ9UK61 1670 aaKnown RBP7.2□□□□□ -1.26
VPS45-207ENST00000477558 RGPD5Q99666 1765 aa7.2□□□□□ -1.26
VPS45-207ENST00000477558 AFF2P51816 1311 aa7.2□□□□□ -1.26
VPS45-207ENST00000477558 NSD3Q9BZ95 1437 aa7.2□□□□□ -1.26
VPS45-207ENST00000477558 ECEL1O95672 775 aa7.19□□□□□ -1.26
VPS45-207ENST00000477558 HDGFL2Q7Z4V5 671 aaPredicted RBP7.19□□□□□ -1.26
VPS45-207ENST00000477558 STK35Q8TDR2 534 aa7.19□□□□□ -1.26
VPS45-207ENST00000477558 UBASH3BQ8TF42 649 aa7.19□□□□□ -1.26
VPS45-207ENST00000477558 TMEM39AQ9NV64 488 aa7.19□□□□□ -1.26
VPS45-207ENST00000477558 TTF2Q9UNY4 1162 aaKnown RBP7.19□□□□□ -1.26
VPS45-207ENST00000477558 AATKQ6ZMQ8 1374 aa7.19□□□□□ -1.26
VPS45-207ENST00000477558 COL5A2P05997 1499 aaPredicted RBP7.19□□□□□ -1.26
VPS45-207ENST00000477558 PEAK1Q9H792 1746 aa7.19□□□□□ -1.26
VPS45-207ENST00000477558 ENC1O14682 589 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 PAGE1O75459 146 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 ALX3O95076 343 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 GCP02774 474 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 CTSBP07858 339 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 RBM25P49756 843 aaKnown RBP7.18□□□□□ -1.26
VPS45-207ENST00000477558 TAF1CQ15572 869 aaPredicted RBP7.18□□□□□ -1.26
VPS45-207ENST00000477558 ZNF772Q68DY9 489 aaPredicted RBP7.18□□□□□ -1.26
VPS45-207ENST00000477558 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 BACH2Q9BYV9 841 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 NRSN2Q9GZP1 204 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 PPM1HQ9ULR3 514 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 RGS12O14924 1447 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 SMG6Q86US8 1419 aaKnown RBP7.18□□□□□ -1.26
VPS45-207ENST00000477558 WASHC2AQ641Q2 1341 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 NSD2O96028 1365 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 FAM83GA6ND36 823 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 DLGAP3O95886 979 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 APBA3O96018 575 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 CELA3AP09093 270 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 CHRNA4P43681 627 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 DUOXA2Q1HG44 320 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 NME9Q86XW9 330 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 LENG1Q96BZ8 264 aaPredicted RBP7.18□□□□□ -1.26
VPS45-207ENST00000477558 C8orf37Q96NL8 207 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 PSMG3-AS1Q96PY0 264 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 USP26Q9BXU7 913 aa7.18□□□□□ -1.26
VPS45-207ENST00000477558 PARP4Q9UKK3 1724 aaKnown RBP7.18□□□□□ -1.26
VPS45-207ENST00000477558 RTL1A6NKG5 1358 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms