RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 A0A0G2JMZ2 1700 aa27.21■■□□□ 1.95
CNIH4-208ENST00000477413 MX1P20591 662 aa27.21■■□□□ 1.95
CNIH4-208ENST00000477413 RAB3GAP1Q15042 981 aa27.21■■□□□ 1.95
CNIH4-208ENST00000477413 TMEM179Q6ZVK1 233 aa27.21■■□□□ 1.95
CNIH4-208ENST00000477413 C16orf86Q6ZW13 317 aa27.21■■□□□ 1.95
CNIH4-208ENST00000477413 OTUD7AQ8TE49 926 aaPredicted RBP27.21■■□□□ 1.95
CNIH4-208ENST00000477413 DDRGK1Q96HY6 314 aa27.21■■□□□ 1.95
CNIH4-208ENST00000477413 ARPP21Q9UBL0 812 aaPredicted RBP27.21■■□□□ 1.95
CNIH4-208ENST00000477413 SLC4A4Q9Y6R1 1079 aa27.21■■□□□ 1.95
CNIH4-208ENST00000477413 RNF113AO15541 343 aaKnown RBP27.2■■□□□ 1.94
CNIH4-208ENST00000477413 FLT3LGP49771 235 aa27.2■■□□□ 1.94
CNIH4-208ENST00000477413 LRRFIP1Q32MZ4 808 aaKnown RBP27.2■■□□□ 1.94
CNIH4-208ENST00000477413 LBX2Q6XYB7 198 aa27.2■■□□□ 1.94
CNIH4-208ENST00000477413 AMOTL1Q8IY63 956 aa27.2■■□□□ 1.94
CNIH4-208ENST00000477413 SLC44A5Q8NCS7 719 aa27.2■■□□□ 1.94
CNIH4-208ENST00000477413 OSBP2Q969R2 916 aa27.2■■□□□ 1.94
CNIH4-208ENST00000477413 CCDC17Q96LX7 622 aa27.2■■□□□ 1.94
CNIH4-208ENST00000477413 P2RX7Q99572 595 aaKnown RBP27.2■■□□□ 1.94
CNIH4-208ENST00000477413 FEZ1Q99689 392 aa27.2■■□□□ 1.94
CNIH4-208ENST00000477413 RLFQ13129 1914 aa27.2■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L12C9JPN9 530 aa27.19■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L21D6R901 530 aa27.19■■□□□ 1.94
CNIH4-208ENST00000477413 VCAM1P19320 739 aa27.19■■□□□ 1.94
CNIH4-208ENST00000477413 SEPT2Q15019 361 aa27.19■■□□□ 1.94
CNIH4-208ENST00000477413 SBK1Q52WX2 424 aa27.19■■□□□ 1.94
CNIH4-208ENST00000477413 ACER1Q8TDN7 264 aa27.19■■□□□ 1.94
CNIH4-208ENST00000477413 COA7Q96BR5 231 aa27.19■■□□□ 1.94
CNIH4-208ENST00000477413 CTR9Q6PD62 1173 aa27.18■■□□□ 1.94
CNIH4-208ENST00000477413 POTEEQ6S8J3 1075 aa27.18■■□□□ 1.94
CNIH4-208ENST00000477413 DYNLL2Q96FJ2 89 aa27.18■■□□□ 1.94
CNIH4-208ENST00000477413 TXNRD2Q9NNW7 524 aa27.18■■□□□ 1.94
CNIH4-208ENST00000477413 STAP2Q9UGK3 403 aa27.18■■□□□ 1.94
CNIH4-208ENST00000477413 PARP14Q460N5 1801 aa27.18■■□□□ 1.94
CNIH4-208ENST00000477413 GSG1L2A8MUP6 293 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L15C9J2P7 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L13C9JLJ4 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L11C9JVI0 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L18D6R9N7 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L22D6RA61 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L17D6RBQ6 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L19D6RCP7 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L20D6RJB6 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 ECM2O94769 699 aaPredicted RBP27.17■■□□□ 1.94
CNIH4-208ENST00000477413 USP17L24Q0WX57 530 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 RBPJLQ9UBG7 517 aa27.17■■□□□ 1.94
CNIH4-208ENST00000477413 GNAT2P19087 354 aa27.16■■□□□ 1.94
CNIH4-208ENST00000477413 EN2P19622 333 aaPredicted RBP27.16■■□□□ 1.94
CNIH4-208ENST00000477413 CDK8P49336 464 aa27.16■■□□□ 1.94
CNIH4-208ENST00000477413 CATSPERGQ6ZRH7 1159 aa27.16■■□□□ 1.94
CNIH4-208ENST00000477413 GJD2Q9UKL4 321 aa27.16■■□□□ 1.94
CNIH4-208ENST00000477413 CYP2D7A0A087X1C5 515 aa27.15■■□□□ 1.94
CNIH4-208ENST00000477413 A0A1W2PRG0 241 aa27.15■■□□□ 1.94
CNIH4-208ENST00000477413 SMIM22K7EJ46 135 aa27.15■■□□□ 1.94
CNIH4-208ENST00000477413 GPAA1O43292 621 aa27.15■■□□□ 1.94
CNIH4-208ENST00000477413 ADCY3O60266 1144 aa27.15■■□□□ 1.94
CNIH4-208ENST00000477413 MTFR1Q15390 333 aa27.15■■□□□ 1.94
CNIH4-208ENST00000477413 GPRC5AQ8NFJ5 357 aa27.15■■□□□ 1.94
CNIH4-208ENST00000477413 AKR1B1P15121 316 aa27.14■■□□□ 1.94
CNIH4-208ENST00000477413 ERVK-9P63128 1117 aa27.14■■□□□ 1.94
CNIH4-208ENST00000477413 ERVK-24P63145 666 aa27.14■■□□□ 1.94
CNIH4-208ENST00000477413 UBXN2AP68543 259 aa27.14■■□□□ 1.94
CNIH4-208ENST00000477413 TICAM2Q86XR7 235 aa27.14■■□□□ 1.94
CNIH4-208ENST00000477413 SMC5Q8IY18 1101 aa27.14■■□□□ 1.94
CNIH4-208ENST00000477413 EPB41L4AQ9HCS5 686 aaPredicted RBP27.14■■□□□ 1.94
CNIH4-208ENST00000477413 RABGAP1Q9Y3P9 1069 aa27.14■■□□□ 1.94
CNIH4-208ENST00000477413 MPHOSPH10O00566 681 aaKnown RBP27.13■■□□□ 1.93
CNIH4-208ENST00000477413 ZYXQ15942 572 aaKnown RBP27.13■■□□□ 1.93
CNIH4-208ENST00000477413 SIAH1Q8IUQ4 282 aa27.13■■□□□ 1.93
CNIH4-208ENST00000477413 LPAR1Q92633 364 aa27.13■■□□□ 1.93
CNIH4-208ENST00000477413 SHISA4Q96DD7 197 aa27.13■■□□□ 1.93
CNIH4-208ENST00000477413 TMX2Q9Y320 296 aa27.13■■□□□ 1.93
CNIH4-208ENST00000477413 ZNF236Q9UL36 1845 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 M0R2C6 588 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 GJB1P08034 283 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 CCL5P13501 91 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 CAPN2P17655 700 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 MAPK4P31152 587 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 ICA1Q05084 483 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 ZMYM1Q5SVZ6 1142 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 ANKRD45Q5TZF3 282 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 PRPF38BQ5VTL8 546 aaKnown RBP27.12■■□□□ 1.93
CNIH4-208ENST00000477413 NKX2-3Q8TAU0 364 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 SOCS4Q8WXH5 440 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 SH2D4AQ9H788 454 aa27.12■■□□□ 1.93
CNIH4-208ENST00000477413 CNMDO75829 334 aa27.11■■□□□ 1.93
CNIH4-208ENST00000477413 GJA8P48165 433 aa27.11■■□□□ 1.93
CNIH4-208ENST00000477413 RPAP3Q9H6T3 665 aaPredicted RBP27.11■■□□□ 1.93
CNIH4-208ENST00000477413 SPDYE16A6NNV3 312 aaPredicted RBP27.1■■□□□ 1.93
CNIH4-208ENST00000477413 INHAP05111 366 aa27.1■■□□□ 1.93
CNIH4-208ENST00000477413 XRCC5P13010 732 aaKnown RBP27.1■■□□□ 1.93
CNIH4-208ENST00000477413 PDE1AP54750 535 aa27.1■■□□□ 1.93
CNIH4-208ENST00000477413 FSD1Q9BTV5 496 aa27.1■■□□□ 1.93
CNIH4-208ENST00000477413 ARHGEF10LQ9HCE6 1279 aa27.1■■□□□ 1.93
CNIH4-208ENST00000477413 ZBTB47Q9UFB7 747 aaPredicted RBP27.1■■□□□ 1.93
CNIH4-208ENST00000477413 ELNP15502 786 aa27.09■■□□□ 1.93
CNIH4-208ENST00000477413 USP6NLQ92738 828 aa27.09■■□□□ 1.93
CNIH4-208ENST00000477413 VCPKMTQ9H867 229 aa27.09■■□□□ 1.93
CNIH4-208ENST00000477413 KANSL2Q9H9L4 492 aa27.09■■□□□ 1.93
CNIH4-208ENST00000477413 PAK6Q9NQU5 681 aaPredicted RBP27.09■■□□□ 1.93
CNIH4-208ENST00000477413 HMGCRP04035 888 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms