RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CYP2C19P33261 490 aa20.19■□□□□ 0.82
APOBEC3F-203ENST00000476513 SHHQ15465 462 aa20.19■□□□□ 0.82
APOBEC3F-203ENST00000476513 TRMT2AQ8IZ69 625 aaKnown RBP20.19■□□□□ 0.82
APOBEC3F-203ENST00000476513 TRPV1Q8NER1 839 aa20.19■□□□□ 0.82
APOBEC3F-203ENST00000476513 MAFAQ8NHW3 353 aaPredicted RBP20.19■□□□□ 0.82
APOBEC3F-203ENST00000476513 NPLOC4Q8TAT6 608 aa20.19■□□□□ 0.82
APOBEC3F-203ENST00000476513 HLA-DOAP06340 250 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 G3BP1Q13283 466 aaKnown RBP eCLIP20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 GRB14Q14449 540 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 C9orf50Q5SZB4 431 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 CATSPERGQ6ZRH7 1159 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 FEZ1Q99689 392 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 SEMA6BQ9H3T3 888 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 BTBD7Q9P203 1132 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 ATP11BQ9Y2G3 1177 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 FRMPD3Q5JV73 1810 aa20.18■□□□□ 0.82
APOBEC3F-203ENST00000476513 IGHA2P01877 340 aa20.17■□□□□ 0.82
APOBEC3F-203ENST00000476513 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
APOBEC3F-203ENST00000476513 GJC2Q5T442 439 aaPredicted RBP20.17■□□□□ 0.82
APOBEC3F-203ENST00000476513 ATF7IPQ6VMQ6 1270 aa20.17■□□□□ 0.82
APOBEC3F-203ENST00000476513 IVNS1ABPQ9Y6Y0 642 aa20.17■□□□□ 0.82
APOBEC3F-203ENST00000476513 PNMA6EA0A0J9YXQ4 647 aa20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 CYP2E1P05181 493 aaPredicted RBP20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 CYBAP13498 195 aa20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 VCAM1P19320 739 aa20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 DYNLL1P63167 89 aaKnown RBP20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 TATDN1Q6P1N9 297 aa20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 LBX2Q6XYB7 198 aa20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 KIAA1683Q9H0B3 1180 aa20.16■□□□□ 0.82
APOBEC3F-203ENST00000476513 USP14P54578 494 aa20.15■□□□□ 0.82
APOBEC3F-203ENST00000476513 SLC39A5Q6ZMH5 540 aa20.15■□□□□ 0.82
APOBEC3F-203ENST00000476513 ACER1Q8TDN7 264 aa20.15■□□□□ 0.82
APOBEC3F-203ENST00000476513 DBNDD2Q9BQY9 259 aa20.15■□□□□ 0.82
APOBEC3F-203ENST00000476513 LTBP2Q14767 1821 aa20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 SPDYE16A6NNV3 312 aaPredicted RBP20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 RAB3GAP1Q15042 981 aa20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 ARRDC4Q8NCT1 418 aa20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 MYLIPQ8WY64 445 aa20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 ARHGAP45Q92619 1136 aa20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 BADQ92934 168 aa20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 TTYH1Q9H313 450 aaPredicted RBP20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 PIH1D3Q9NQM4 214 aaKnown RBP20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 PRDM5Q9NQX1 630 aaPredicted RBP20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 VCANP13611 3396 aa20.14■□□□□ 0.81
APOBEC3F-203ENST00000476513 GNAI2P04899 355 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 ZAP70P43403 619 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 RARSP54136 660 aaKnown RBP20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 SMAD3P84022 425 aaKnown RBP20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 TRIM60Q495X7 471 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 TNNI3KQ59H18 835 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 CCDC158Q5M9N0 1113 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 GPR108Q9NPR9 543 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 PRDM6Q9NQX0 595 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 FPGT-TNNI3KV9GXZ4 949 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 CDK5RAP2Q96SN8 1893 aa20.13■□□□□ 0.81
APOBEC3F-203ENST00000476513 TTC28Q96AY4 2481 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 FOCADQ5VW36 1801 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 KBTBD13C9JR72 458 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 CYP7A1P22680 504 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 SNX17Q15036 470 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 ANO1Q5XXA6 986 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 OLFML2BQ68BL8 750 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 EHD4Q9H223 541 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 RPAP3Q9H6T3 665 aaPredicted RBP20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 SERPINB13Q9UIV8 391 aa20.12■□□□□ 0.81
APOBEC3F-203ENST00000476513 IGSF3O75054 1194 aa20.11■□□□□ 0.81
APOBEC3F-203ENST00000476513 ADORA2AP29274 412 aa20.11■□□□□ 0.81
APOBEC3F-203ENST00000476513 ABCB5Q2M3G0 1257 aa20.11■□□□□ 0.81
APOBEC3F-203ENST00000476513 CERKLQ49MI3 558 aaPredicted RBP20.11■□□□□ 0.81
APOBEC3F-203ENST00000476513 SH3RF1Q7Z6J0 888 aa20.11■□□□□ 0.81
APOBEC3F-203ENST00000476513 DPP9Q86TI2 863 aa20.11■□□□□ 0.81
APOBEC3F-203ENST00000476513 ZNF512BQ96KM6 892 aaPredicted RBP20.11■□□□□ 0.81
APOBEC3F-203ENST00000476513 PDLIM7Q9NR12 457 aa20.11■□□□□ 0.81
APOBEC3F-203ENST00000476513 TRIM43BA6NCK2 446 aa20.1■□□□□ 0.81
APOBEC3F-203ENST00000476513 MYCNP04198 464 aaPredicted RBP20.1■□□□□ 0.81
APOBEC3F-203ENST00000476513 USP5P45974 858 aa20.1■□□□□ 0.81
APOBEC3F-203ENST00000476513 MIGA1Q8NAN2 632 aa20.1■□□□□ 0.81
APOBEC3F-203ENST00000476513 TRIM43Q96BQ3 446 aaPredicted RBP20.1■□□□□ 0.81
APOBEC3F-203ENST00000476513 MOV10L1Q9BXT6 1211 aaKnown RBP20.1■□□□□ 0.81
APOBEC3F-203ENST00000476513 SEPT4O43236 478 aa20.09■□□□□ 0.81
APOBEC3F-203ENST00000476513 FOSL2P15408 326 aa20.09■□□□□ 0.81
APOBEC3F-203ENST00000476513 GUCY1A2P33402 732 aa20.09■□□□□ 0.81
APOBEC3F-203ENST00000476513 ADCYAP1R1P41586 468 aa20.09■□□□□ 0.81
APOBEC3F-203ENST00000476513 CABP5Q9NP86 173 aa20.09■□□□□ 0.81
APOBEC3F-203ENST00000476513 RLFQ13129 1914 aa20.09■□□□□ 0.81
APOBEC3F-203ENST00000476513 SPTBN5Q9NRC6 3674 aaKnown RBP20.08■□□□□ 0.81
APOBEC3F-203ENST00000476513 STRNO43815 780 aa20.08■□□□□ 0.81
APOBEC3F-203ENST00000476513 COBLO75128 1261 aa20.08■□□□□ 0.81
APOBEC3F-203ENST00000476513 SHMT1P34896 483 aa20.08■□□□□ 0.81
APOBEC3F-203ENST00000476513 TTC6Q86TZ1 520 aa20.08■□□□□ 0.81
APOBEC3F-203ENST00000476513 FERMT2Q96AC1 680 aa20.08■□□□□ 0.81
APOBEC3F-203ENST00000476513 TNNQ9UQP3 1299 aa20.08■□□□□ 0.81
APOBEC3F-203ENST00000476513 ZNF316A6NFI3 1004 aaPredicted RBP20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 IDH1O75874 414 aaKnown RBP20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 ERCC3P19447 782 aa20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 COG2Q14746 738 aa20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 LRRC41Q15345 812 aa20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 PRAMEF19Q5SWL8 479 aa20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 C1orf53Q5VUE5 145 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms