RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 PLCG2P16885 1265 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 SHROOM1Q2M3G4 852 aaPredicted RBP13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 PLEKHH3Q7Z736 793 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 EAF2Q96CJ1 260 aaPredicted RBP13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 C12orf42Q96LP6 360 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 GUCD1Q96NT3 240 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 GPR108Q9NPR9 543 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 DBNLQ9UJU6 430 aaKnown RBP13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 ZBTB21Q9ULJ3 1066 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 FLT1P17948 1338 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 MAST2Q6P0Q8 1798 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 FOCADQ5VW36 1801 aa13.55□□□□□ -0.24
EXOSC1-208ENST00000476234 BAG3O95817 575 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 MDM2Q00987 491 aaPredicted RBP13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 MAP2K5Q13163 448 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 GORABQ5T7V8 394 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 C20orf194Q5TEA3 1177 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 ADGRA1Q86SQ6 560 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 AATFQ9NY61 560 aaKnown RBP eCLIP13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 EXOC6BQ9Y2D4 811 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 FRMPD3Q5JV73 1810 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 CDK5RAP2Q96SN8 1893 aa13.54□□□□□ -0.24
EXOSC1-208ENST00000476234 CNMDO75829 334 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 CYP2E1P05181 493 aaPredicted RBP13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 HOXC6P09630 235 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 NAA16Q6N069 864 aaPredicted RBP13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 USP17L2Q6R6M4 530 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 TGFBRAP1Q8WUH2 860 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 PIH1D3Q9NQM4 214 aaKnown RBP13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 PALD1Q9ULE6 856 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 RABGAP1Q9Y3P9 1069 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
EXOSC1-208ENST00000476234 SLC15A5A6NIM6 579 aa13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 GDF11O95390 407 aa13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 ZAP70P43403 619 aa13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 TATDN1Q6P1N9 297 aa13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 LBX2Q6XYB7 198 aa13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 FLRT1Q9NZU1 646 aa13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
EXOSC1-208ENST00000476234 MSCO60682 206 aa13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 PTPREP23469 700 aa13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 CCNA1P78396 465 aa13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 CRACR2BQ8N4Y2 399 aaPredicted RBP13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 LPAR1Q92633 364 aa13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 ZNF512BQ96KM6 892 aaPredicted RBP13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 PAGR1Q9BTK6 254 aa13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 DDX20Q9UHI6 824 aaKnown RBP13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
EXOSC1-208ENST00000476234 LTBP2Q14767 1821 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L15C9J2P7 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L13C9JLJ4 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L11C9JVI0 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L18D6R9N7 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L22D6RA61 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L17D6RBQ6 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L19D6RCP7 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L20D6RJB6 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 DNM1LO00429 736 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 USP17L24Q0WX57 530 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 GRB14Q14449 540 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 TTC39AQ5SRH9 613 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 MFSD14CQ5VZR4 134 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 CATSPERGQ6ZRH7 1159 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 SENP6Q9GZR1 1112 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 KIAA1683Q9H0B3 1180 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 ANTXR1Q9H6X2 564 aa13.5□□□□□ -0.25
EXOSC1-208ENST00000476234 C19orf67A6NJJ6 358 aa13.49□□□□□ -0.25
EXOSC1-208ENST00000476234 GH2P01242 217 aa13.49□□□□□ -0.25
EXOSC1-208ENST00000476234 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
EXOSC1-208ENST00000476234 LBHD1Q9BQE6 289 aaPredicted RBP13.49□□□□□ -0.25
EXOSC1-208ENST00000476234 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
EXOSC1-208ENST00000476234 EHD4Q9H223 541 aa13.49□□□□□ -0.25
EXOSC1-208ENST00000476234 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
EXOSC1-208ENST00000476234 LAMA2P24043 3122 aaKnown RBP13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 HLA-DOAP06340 250 aa13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 CYBAP13498 195 aa13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 USP14P54578 494 aa13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 CCDC158Q5M9N0 1113 aa13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 NPLOC4Q8TAT6 608 aa13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 BTBD7Q9P203 1132 aa13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 SAP30BPQ9UHR5 308 aaKnown RBP13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 DNAH12Q6ZR08 3092 aa13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
EXOSC1-208ENST00000476234 RLFQ13129 1914 aa13.47□□□□□ -0.25
EXOSC1-208ENST00000476234 GABBR2O75899 941 aa13.47□□□□□ -0.25
EXOSC1-208ENST00000476234 VCAM1P19320 739 aa13.47□□□□□ -0.25
EXOSC1-208ENST00000476234 RTP1P59025 263 aa13.47□□□□□ -0.25
EXOSC1-208ENST00000476234 DYNLL1P63167 89 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms