RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 USP17L11C9JVI0 530 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP17L18D6R9N7 530 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP17L22D6RA61 530 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP17L17D6RBQ6 530 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP17L19D6RCP7 530 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP17L20D6RJB6 530 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 FXR1P51114 621 aaKnown RBP eCLIP10.19□□□□□ -0.78
SATB1-213ENST00000476178 PLCD1P51178 756 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP14P54578 494 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 ERVK-9P63128 1117 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 ERVK-24P63145 666 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 USP17L24Q0WX57 530 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 TRIM32Q13049 653 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 Q3C1V9 767 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 NECAB2Q7Z6G3 386 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 SOCS4Q8WXH5 440 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 HAUS7Q99871 368 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 CDK5RAP2Q96SN8 1893 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 FOCADQ5VW36 1801 aa10.19□□□□□ -0.78
SATB1-213ENST00000476178 GLRX3O76003 335 aaKnown RBP10.18□□□□□ -0.78
SATB1-213ENST00000476178 ZKSCAN1P17029 563 aaPredicted RBP10.18□□□□□ -0.78
SATB1-213ENST00000476178 RGS2P41220 211 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 CCNA1P78396 465 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 SLFNL1Q499Z3 407 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 GPR142Q7Z601 462 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 PLEKHH3Q7Z736 793 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 TRMT44Q8IYL2 757 aaKnown RBP10.18□□□□□ -0.78
SATB1-213ENST00000476178 ACER1Q8TDN7 264 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 TRIB2Q92519 343 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 KIAA1683Q9H0B3 1180 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 PORCNQ9H237 461 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 PAG1Q9NWQ8 432 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 RBM27Q9P2N5 1060 aaKnown RBP10.18□□□□□ -0.78
SATB1-213ENST00000476178 ATAD5Q96QE3 1844 aa10.18□□□□□ -0.78
SATB1-213ENST00000476178 LOC285556D6RIA3 1793 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 CHGBP05060 677 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
SATB1-213ENST00000476178 PRKAR2AP13861 404 aaKnown RBP10.17□□□□□ -0.78
SATB1-213ENST00000476178 SHMT1P34896 483 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 ADD2P35612 726 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 RRP1P56182 461 aaKnown RBP10.17□□□□□ -0.78
SATB1-213ENST00000476178 SEPT2Q15019 361 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 CATSPERGQ6ZRH7 1159 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 AMOTL1Q8IY63 956 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 LCORLQ8N3X6 602 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 ANKLE1Q8NAG6 615 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 DIS3LQ8TF46 1054 aaKnown RBP10.17□□□□□ -0.78
SATB1-213ENST00000476178 SDR42E1Q8WUS8 393 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 DDRGK1Q96HY6 314 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.17□□□□□ -0.78
SATB1-213ENST00000476178 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 ARMT1Q9H993 441 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 RABGAP1Q9Y3P9 1069 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 IVNS1ABPQ9Y6Y0 642 aa10.17□□□□□ -0.78
SATB1-213ENST00000476178 MYH1P12882 1939 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 CYP2D6P10635 497 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 VCAM1P19320 739 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 EVX2Q03828 476 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 GABPAQ06546 454 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 C7orf61Q8IZ16 206 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 C12orf42Q96LP6 360 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 TANGO6Q9C0B7 1094 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 C11orf49Q9H6J7 331 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 RPAP3Q9H6T3 665 aaPredicted RBP10.16□□□□□ -0.78
SATB1-213ENST00000476178 DCP1AQ9NPI6 582 aaPredicted RBP10.16□□□□□ -0.78
SATB1-213ENST00000476178 ECHDC1Q9NTX5 307 aa10.16□□□□□ -0.78
SATB1-213ENST00000476178 PRKAB2O43741 272 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 MBD4O95243 580 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 ATP2B2Q01814 1243 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 CACNB2Q08289 660 aaPredicted RBP10.15□□□□□ -0.78
SATB1-213ENST00000476178 MAP2K5Q13163 448 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 UBE3CQ15386 1083 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 CCL14Q16627 93 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 MORN1Q5T089 497 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 MFSD14CQ5VZR4 134 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 SAMD1Q6SPF0 538 aaPredicted RBP10.15□□□□□ -0.78
SATB1-213ENST00000476178 DYNLL2Q96FJ2 89 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 APBA2Q99767 749 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 HOXC10Q9NYD6 342 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 STAP2Q9UGK3 403 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 SWAP70Q9UH65 585 aa10.15□□□□□ -0.78
SATB1-213ENST00000476178 SLC15A5A6NIM6 579 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 CNMDO75829 334 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 CNGA1P29973 690 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 CCND3P30281 292 aaPredicted RBP10.14□□□□□ -0.79
SATB1-213ENST00000476178 GUCY1A2P33402 732 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 PLS1Q14651 629 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 COG2Q14746 738 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 ZSCAN25Q6NSZ9 544 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 TMEM179Q6ZVK1 233 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 SLC44A5Q8NCS7 719 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 USP6NLQ92738 828 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 YTHDC1Q96MU7 727 aaKnown RBP10.14□□□□□ -0.79
SATB1-213ENST00000476178 CRBNQ96SW2 442 aa10.14□□□□□ -0.79
SATB1-213ENST00000476178 PUS7LQ9H0K6 701 aaKnown RBP10.14□□□□□ -0.79
SATB1-213ENST00000476178 ARHGEF10LQ9HCE6 1279 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms