RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
BEST3-204ENST00000476098 TMEM179Q6ZVK1 233 aa13.66□□□□□ -0.22
BEST3-204ENST00000476098 CDCA5Q96FF9 252 aa13.66□□□□□ -0.22
BEST3-204ENST00000476098 ZNF341Q9BYN7 854 aa13.66□□□□□ -0.22
BEST3-204ENST00000476098 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
BEST3-204ENST00000476098 FZD1Q9UP38 647 aa13.66□□□□□ -0.22
BEST3-204ENST00000476098 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
BEST3-204ENST00000476098 SSC5DA1L4H1 1573 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 CCDC69A6NI79 296 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
BEST3-204ENST00000476098 APOA5Q6Q788 366 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 CLEC10AQ8IUN9 316 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 SIAH1Q8IUQ4 282 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 KLRG1Q96E93 195 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 TMEM47Q9BQJ4 181 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 KANSL2Q9H9L4 492 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 SLC12A7Q9Y666 1083 aa13.65□□□□□ -0.22
BEST3-204ENST00000476098 CTNND1O60716 968 aaKnown RBP13.64□□□□□ -0.23
BEST3-204ENST00000476098 PFKFB2O60825 505 aa13.64□□□□□ -0.23
BEST3-204ENST00000476098 TTLL1O95922 423 aa13.64□□□□□ -0.23
BEST3-204ENST00000476098 ST3GAL1Q11201 340 aa13.64□□□□□ -0.23
BEST3-204ENST00000476098 STK3Q13188 491 aa13.64□□□□□ -0.23
BEST3-204ENST00000476098 CUL4AQ13619 759 aa13.64□□□□□ -0.23
BEST3-204ENST00000476098 NECAB1Q8N987 351 aa13.64□□□□□ -0.23
BEST3-204ENST00000476098 ZBTB21Q9ULJ3 1066 aa13.64□□□□□ -0.23
BEST3-204ENST00000476098 INPP5BP32019 993 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 TROAPQ12815 778 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 RAB3GAP1Q15042 981 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 MKL1Q969V6 931 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 MYL10Q9BUA6 226 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 SLKQ9H2G2 1235 aaPredicted RBP13.63□□□□□ -0.23
BEST3-204ENST00000476098 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 NAP1L2Q9ULW6 460 aaPredicted RBP13.63□□□□□ -0.23
BEST3-204ENST00000476098 GOLGA8BA8MQT2 603 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 TRAF5O00463 557 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 ZBTB43O43298 467 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 ASNSP08243 561 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
BEST3-204ENST00000476098 EEF2P13639 858 aaKnown RBP13.63□□□□□ -0.23
BEST3-204ENST00000476098 RXRAP19793 462 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
BEST3-204ENST00000476098 SCRN1Q12765 414 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 PRKG1Q13976 671 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 SYNE3Q6ZMZ3 975 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 CATIPQ7Z7H3 387 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 PNMA1Q8ND90 353 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 WRNIP1Q96S55 665 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 KAT14Q9H8E8 782 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 NYAP2Q9P242 653 aa13.63□□□□□ -0.23
BEST3-204ENST00000476098 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
BEST3-204ENST00000476098 RCAN1P53805 252 aa13.62□□□□□ -0.23
BEST3-204ENST00000476098 ICA1Q05084 483 aa13.62□□□□□ -0.23
BEST3-204ENST00000476098 FMR1Q06787 632 aaKnown RBP eCLIP13.62□□□□□ -0.23
BEST3-204ENST00000476098 MICU3Q86XE3 530 aa13.62□□□□□ -0.23
BEST3-204ENST00000476098 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
BEST3-204ENST00000476098 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.62□□□□□ -0.23
BEST3-204ENST00000476098 ZKSCAN4Q969J2 545 aaPredicted RBP13.62□□□□□ -0.23
BEST3-204ENST00000476098 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
BEST3-204ENST00000476098 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
BEST3-204ENST00000476098 FAM217BQ9NTX9 383 aaPredicted RBP13.62□□□□□ -0.23
BEST3-204ENST00000476098 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.62□□□□□ -0.23
BEST3-204ENST00000476098 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
BEST3-204ENST00000476098 DDAH1O94760 285 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 NF2P35240 595 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 METAP2P50579 478 aaKnown RBP eCLIP13.61□□□□□ -0.23
BEST3-204ENST00000476098 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 ATP2B2Q01814 1243 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 SCYL3Q8IZE3 742 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 FANCBQ8NB91 859 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 SPRYD3Q8NCJ5 442 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 NUP133Q8WUM0 1156 aa13.61□□□□□ -0.23
BEST3-204ENST00000476098 POLR2AP24928 1970 aaKnown RBP13.61□□□□□ -0.23
BEST3-204ENST00000476098 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
BEST3-204ENST00000476098 CDC27P30260 824 aa13.6□□□□□ -0.23
BEST3-204ENST00000476098 ADD1P35611 737 aaKnown RBP13.6□□□□□ -0.23
BEST3-204ENST00000476098 NOL9Q5SY16 702 aaKnown RBP13.6□□□□□ -0.23
BEST3-204ENST00000476098 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
BEST3-204ENST00000476098 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.6□□□□□ -0.23
BEST3-204ENST00000476098 LRRC47Q8N1G4 583 aaKnown RBP13.6□□□□□ -0.23
BEST3-204ENST00000476098 ACER1Q8TDN7 264 aa13.6□□□□□ -0.23
BEST3-204ENST00000476098 INTS4Q96HW7 963 aaKnown RBP13.6□□□□□ -0.23
BEST3-204ENST00000476098 GOLGA8AA7E2F4 631 aa13.59□□□□□ -0.23
BEST3-204ENST00000476098 KIF3CO14782 793 aa13.59□□□□□ -0.23
BEST3-204ENST00000476098 ITGBL1O95965 494 aaPredicted RBP13.59□□□□□ -0.23
BEST3-204ENST00000476098 CALM1P0DP23 149 aa13.59□□□□□ -0.23
BEST3-204ENST00000476098 CALM2P0DP24 149 aa13.59□□□□□ -0.23
BEST3-204ENST00000476098 CALM3P0DP25 149 aa13.59□□□□□ -0.23
BEST3-204ENST00000476098 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
BEST3-204ENST00000476098 MOB2Q70IA6 237 aa13.59□□□□□ -0.23
BEST3-204ENST00000476098 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
BEST3-204ENST00000476098 MAP3K14Q99558 947 aa13.59□□□□□ -0.23
BEST3-204ENST00000476098 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms