RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 IFIT2P09913 472 aaKnown RBP11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 PDE6AP16499 860 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 PLCG2P16885 1265 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 CTGFP29279 349 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 SOX10P56693 466 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 SLC4A8Q2Y0W8 1093 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 PRRT2Q7Z6L0 340 aaPredicted RBP11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 TMEM87AQ8NBN3 555 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 NOL10Q9BSC4 688 aaKnown RBP11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 PDCL3Q9H2J4 239 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 BOLA2Q9H3K6 86 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 ZCCHC17Q9NP64 241 aaKnown RBP11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 ANO2Q9NQ90 1003 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 PI4KBQ9UBF8 816 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 ZKSCAN5Q9Y2L8 839 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 PDE4DIPQ5VU43 2346 aa11.32□□□□□ -0.6
SEMA3C-208ENST00000475955 ATP5JP18859 108 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 CAP2P40123 477 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 EVX2Q03828 476 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 MAP3K12Q12852 859 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 C17orf99Q6UX52 265 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 KIAA1211Q6ZU35 1233 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 GPT2Q8TD30 523 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 ERO1AQ96HE7 468 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 GPATCH3Q96I76 525 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 RBSNQ9H1K0 784 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 CPA4Q9UI42 421 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 ZDHHC9Q9Y397 364 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 TTC41PQ6P2S7 1318 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 ZNF532Q9HCE3 1301 aa11.31□□□□□ -0.6
SEMA3C-208ENST00000475955 TRIM75PA6NK02 468 aa11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 CYP2C8P10632 490 aa11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 HSPA4P34932 840 aa11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 SLC9C2Q5TAH2 1124 aa11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 RILPL2Q969X0 211 aa11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 ZSCAN31Q96LW9 406 aaPredicted RBP11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 HAUS7Q99871 368 aa11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 DHX36Q9H2U1 1008 aaKnown RBP11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 EFCC1Q9HA90 598 aa11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 HERC5Q9UII4 1024 aaKnown RBP11.3□□□□□ -0.6
SEMA3C-208ENST00000475955 HIP1O00291 1037 aa11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 TPM3P06753 285 aa11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 BCRP11274 1271 aa11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 LACTBP83111 547 aaPredicted RBP11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 SPP2Q13103 211 aa11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 TTF1Q15361 905 aaPredicted RBP11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 TREML2Q5T2D2 321 aa11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 GADL1Q6ZQY3 521 aa11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 FOXP4Q8IVH2 680 aaPredicted RBP11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 PAG1Q9NWQ8 432 aa11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 RAD50Q92878 1312 aa11.29□□□□□ -0.6
SEMA3C-208ENST00000475955 BRCA2P51587 3418 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 PLXNB2O15031 1838 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 GDF11O95390 407 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 ADD2P35612 726 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 USP5P45974 858 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 PLCD1P51178 756 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 TSHZ3Q63HK5 1081 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 LCORLQ8N3X6 602 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 ZNF280CQ8ND82 737 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 TM6SF1Q9BZW5 370 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 SH2B1Q9NRF2 756 aaPredicted RBP11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 TMEM63CQ9P1W3 806 aa11.28□□□□□ -0.6
SEMA3C-208ENST00000475955 USP17L5A8MUK1 530 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 SMIM22K7EJ46 135 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 DYNC1I1O14576 645 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 PRKAB2O43741 272 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 HMGCS2P54868 508 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 SDR42E1Q8WUS8 393 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 TRIM47Q96LD4 638 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 AGTPBP1Q9UPW5 1226 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 PTCH2Q9Y6C5 1203 aa11.27□□□□□ -0.61
SEMA3C-208ENST00000475955 SYCE3A1L190 88 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 SGSM2O43147 1006 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 CYP2D6P10635 497 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 SHMT1P34896 483 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 UBE2HP62256 183 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 MLLT1Q03111 559 aaPredicted RBP11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 GABPAQ06546 454 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 PKP1Q13835 747 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 SH3D19Q5HYK7 790 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 TATDN1Q6P1N9 297 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 SASS6Q6UVJ0 657 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 CERS3Q8IU89 383 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 ARMC5Q96C12 935 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms