RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 ZNF280CQ8ND82 737 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 ERO1AQ96HE7 468 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 EFCC1Q9HA90 598 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 ZCCHC17Q9NP64 241 aaKnown RBP17.98■□□□□ 0.47
SNX13-207ENST00000475800 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 ANAPC4Q9UJX5 808 aa17.98■□□□□ 0.47
SNX13-207ENST00000475800 CENPFP49454 3210 aa17.97■□□□□ 0.47
SNX13-207ENST00000475800 POTEFA5A3E0 1075 aa17.97■□□□□ 0.47
SNX13-207ENST00000475800 FASTKD5Q7L8L6 764 aaKnown RBP17.97■□□□□ 0.47
SNX13-207ENST00000475800 FAM43AQ8N2R8 423 aa17.97■□□□□ 0.47
SNX13-207ENST00000475800 HTTP42858 3142 aa17.96■□□□□ 0.47
SNX13-207ENST00000475800 A0A0G2JLL6 359 aaPredicted RBP17.96■□□□□ 0.47
SNX13-207ENST00000475800 C19orf81C9J6K1 198 aa17.96■□□□□ 0.47
SNX13-207ENST00000475800 MPHOSPH10O00566 681 aaKnown RBP17.96■□□□□ 0.47
SNX13-207ENST00000475800 CDC45O75419 566 aa17.96■□□□□ 0.47
SNX13-207ENST00000475800 PCP11498 1178 aaKnown RBP17.96■□□□□ 0.47
SNX13-207ENST00000475800 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
SNX13-207ENST00000475800 PRRT2Q7Z6L0 340 aaPredicted RBP17.96■□□□□ 0.47
SNX13-207ENST00000475800 ZNF444Q8N0Y2 327 aaPredicted RBP17.96■□□□□ 0.47
SNX13-207ENST00000475800 GREB1LQ9C091 1923 aaPredicted RBP17.96■□□□□ 0.47
SNX13-207ENST00000475800 LOC285556D6RIA3 1793 aa17.95■□□□□ 0.46
SNX13-207ENST00000475800 TRIM75PA6NK02 468 aa17.95■□□□□ 0.46
SNX13-207ENST00000475800 NT5C2P49902 561 aa17.95■□□□□ 0.46
SNX13-207ENST00000475800 JAG1P78504 1218 aa17.95■□□□□ 0.46
SNX13-207ENST00000475800 SPP2Q13103 211 aa17.95■□□□□ 0.46
SNX13-207ENST00000475800 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
SNX13-207ENST00000475800 ZFYVE28Q9HCC9 887 aa17.95■□□□□ 0.46
SNX13-207ENST00000475800 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.95■□□□□ 0.46
SNX13-207ENST00000475800 PTPN22Q9Y2R2 807 aa17.95■□□□□ 0.46
SNX13-207ENST00000475800 USP17L10C9JJH3 530 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 SMIM22K7EJ46 135 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 AKR1B1P15121 316 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 RASA1P20936 1047 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 BACE1P56817 501 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 SH3D19Q5HYK7 790 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 CCDC84Q86UT8 332 aaPredicted RBP17.94■□□□□ 0.46
SNX13-207ENST00000475800 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
SNX13-207ENST00000475800 ESYT1Q9BSJ8 1104 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 IL25Q9H293 177 aa17.94■□□□□ 0.46
SNX13-207ENST00000475800 RNF41Q9H4P4 317 aaPredicted RBP17.94■□□□□ 0.46
SNX13-207ENST00000475800 KIAA0100Q14667 2235 aaKnown RBP17.93■□□□□ 0.46
SNX13-207ENST00000475800 ZNF213O14771 459 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 ORC4O43929 436 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 FGRP09769 529 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 GUCY1A2P33402 732 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 USP14P54578 494 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 SEPT2Q15019 361 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 IMMTQ16891 758 aaKnown RBP17.93■□□□□ 0.46
SNX13-207ENST00000475800 PPP4R3BQ5MIZ7 849 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 STK11IPQ8N1F8 1099 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 FEZ1Q99689 392 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 SH2D4AQ9H788 454 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 KANSL2Q9H9L4 492 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 ARHGEF10LQ9HCE6 1279 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 TMOD4Q9NZQ9 345 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNX13-207ENST00000475800 SLC45A1Q9Y2W3 748 aa17.93■□□□□ 0.46
SNX13-207ENST00000475800 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
SNX13-207ENST00000475800 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 BTBD19C9JJ37 291 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 ICA1Q05084 483 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 CTDSPL2Q05D32 466 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 MTMR2Q13614 643 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
SNX13-207ENST00000475800 PRPF38BQ5VTL8 546 aaKnown RBP17.92■□□□□ 0.46
SNX13-207ENST00000475800 USP17L2Q6R6M4 530 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 GADL1Q6ZQY3 521 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 KIAA1683Q9H0B3 1180 aa17.92■□□□□ 0.46
SNX13-207ENST00000475800 ZSWIM8A7E2V4 1837 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 PRDM1O75626 825 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 TSPY3P0CV98 308 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 TSPY8P0CW00 308 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 HMGCS2P54868 508 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 PABPC4Q13310 644 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNX13-207ENST00000475800 MOGSQ13724 837 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 STAG1Q8WVM7 1258 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 ARHGAP39Q9C0H5 1083 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 AGTPBP1Q9UPW5 1226 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 PTCH2Q9Y6C5 1203 aa17.91■□□□□ 0.46
SNX13-207ENST00000475800 MKI67P46013 3256 aaKnown RBP17.91■□□□□ 0.46
SNX13-207ENST00000475800 EN2P19622 333 aaPredicted RBP17.9■□□□□ 0.46
SNX13-207ENST00000475800 HAND2P61296 217 aa17.9■□□□□ 0.46
SNX13-207ENST00000475800 NEDD1Q8NHV4 660 aa17.9■□□□□ 0.46
SNX13-207ENST00000475800 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
SNX13-207ENST00000475800 PNMA3Q9UL41 463 aa17.9■□□□□ 0.46
SNX13-207ENST00000475800 TSPY2A6NKD2 308 aa17.89■□□□□ 0.45
SNX13-207ENST00000475800 PDHXO00330 501 aa17.89■□□□□ 0.45
SNX13-207ENST00000475800 TFAP4Q01664 338 aa17.89■□□□□ 0.45
SNX13-207ENST00000475800 PTH1RQ03431 593 aa17.89■□□□□ 0.45
SNX13-207ENST00000475800 MAP4K1Q92918 833 aa17.89■□□□□ 0.45
SNX13-207ENST00000475800 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
SNX13-207ENST00000475800 TOMM22Q9NS69 142 aa17.89■□□□□ 0.45
SNX13-207ENST00000475800 NYAP2Q9P242 653 aa17.89■□□□□ 0.45
SNX13-207ENST00000475800 SYNPO2Q9UMS6 1093 aa17.89■□□□□ 0.45
SNX13-207ENST00000475800 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
SNX13-207ENST00000475800 SLC9C1Q4G0N8 1177 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms