RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 USP17L11C9JVI0 530 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 USP17L18D6R9N7 530 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 USP17L22D6RA61 530 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 USP17L17D6RBQ6 530 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 USP17L19D6RCP7 530 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 USP17L20D6RJB6 530 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 HNRNPUQ00839 825 aaKnown RBP eCLIP17.19■□□□□ 0.34
FAM3A-218ENST00000475657 USP17L24Q0WX57 530 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 OLFML2BQ68BL8 750 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 SH3RF1Q7Z6J0 888 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 NPLOC4Q8TAT6 608 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 XAGE2Q96GT9 111 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 HMG20BQ9P0W2 317 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 HDAC5Q9UQL6 1122 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 AKAP2Q9Y2D5 859 aa17.19■□□□□ 0.34
FAM3A-218ENST00000475657 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-218ENST00000475657 A0A1B0GUL7 405 aa17.18■□□□□ 0.34
FAM3A-218ENST00000475657 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-218ENST00000475657 SEPT4O43236 478 aa17.18■□□□□ 0.34
FAM3A-218ENST00000475657 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-218ENST00000475657 PLCG2P16885 1265 aa17.18■□□□□ 0.34
FAM3A-218ENST00000475657 DNAJB2P25686 324 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
FAM3A-218ENST00000475657 PPP4CP60510 307 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 TLE2Q04725 743 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 AKNAD1Q5T1N1 836 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 WDR78Q5VTH9 848 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 CATSPERGQ6ZRH7 1159 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 CRACR2BQ8N4Y2 399 aaPredicted RBP17.17■□□□□ 0.34
FAM3A-218ENST00000475657 SPATA5Q8NB90 893 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
FAM3A-218ENST00000475657 ASB2Q96Q27 587 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 RAI14Q9P0K7 980 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 PA2G4Q9UQ80 394 aaKnown RBP17.17■□□□□ 0.34
FAM3A-218ENST00000475657 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
FAM3A-218ENST00000475657 KIAA0355O15063 1070 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 STRNO43815 780 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 GDF11O95390 407 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 BAG3O95817 575 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 ADCYAP1R1P41586 468 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 EPHB4P54760 987 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 SLFN5Q08AF3 891 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 TBC1D9Q6ZT07 1266 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 NOL10Q9BSC4 688 aaKnown RBP17.16■□□□□ 0.34
FAM3A-218ENST00000475657 TRIM34Q9BYJ4 488 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 ZBED9Q6R2W3 1325 aa17.16■□□□□ 0.34
FAM3A-218ENST00000475657 E9PSI1 815 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 ITGB8P26012 769 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 USP14P54578 494 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 MAP3K12Q12852 859 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 LRRC41Q15345 812 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
FAM3A-218ENST00000475657 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 DPP9Q86TI2 863 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 ADAMTS19Q8TE59 1207 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
FAM3A-218ENST00000475657 BTBD7Q9P203 1132 aa17.15■□□□□ 0.34
FAM3A-218ENST00000475657 ARIH1Q9Y4X5 557 aaPredicted RBP17.15■□□□□ 0.34
FAM3A-218ENST00000475657 CLTBP09497 229 aa17.14■□□□□ 0.33
FAM3A-218ENST00000475657 TIFAQ96CG3 184 aa17.14■□□□□ 0.33
FAM3A-218ENST00000475657 KIAA1683Q9H0B3 1180 aa17.14■□□□□ 0.33
FAM3A-218ENST00000475657 THEGQ9P2T0 379 aa17.14■□□□□ 0.33
FAM3A-218ENST00000475657 PHF24Q9UPV7 400 aa17.14■□□□□ 0.33
FAM3A-218ENST00000475657 PIEZO1Q92508 2521 aa17.14■□□□□ 0.33
FAM3A-218ENST00000475657 FLT1P17948 1338 aa17.14■□□□□ 0.33
FAM3A-218ENST00000475657 SIPA1L1O43166 1804 aa17.14■□□□□ 0.33
FAM3A-218ENST00000475657 IGSF3O75054 1194 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 GH2P01242 217 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 RAG1P15918 1043 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-218ENST00000475657 MRPS5P82675 430 aaKnown RBP17.13■□□□□ 0.33
FAM3A-218ENST00000475657 FPGSQ05932 587 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 TGFBRAP1Q8WUH2 860 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 GAS2L1Q99501 681 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-218ENST00000475657 FEZ1Q99689 392 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 PALD1Q9ULE6 856 aa17.13■□□□□ 0.33
FAM3A-218ENST00000475657 SPDYE16A6NNV3 312 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-218ENST00000475657 HLA-DOAP06340 250 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 VCAM1P19320 739 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 ADORA2AP29274 412 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 TFCP2Q12800 502 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 TATDN1Q6P1N9 297 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 SHCBP1Q8NEM2 672 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 FERMT2Q96AC1 680 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-218ENST00000475657 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 AATFQ9NY61 560 aaKnown RBP eCLIP17.12■□□□□ 0.33
FAM3A-218ENST00000475657 SLC5A4Q9NY91 659 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 NRBP1Q9UHY1 535 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 MYO9BQ13459 2157 aa17.12■□□□□ 0.33
FAM3A-218ENST00000475657 ANO1Q5XXA6 986 aa17.11■□□□□ 0.33
FAM3A-218ENST00000475657 NAA16Q6N069 864 aaPredicted RBP17.11■□□□□ 0.33
FAM3A-218ENST00000475657 ABRAQ8N0Z2 381 aa17.11■□□□□ 0.33
FAM3A-218ENST00000475657 NEUROD6Q96NK8 337 aa17.11■□□□□ 0.33
FAM3A-218ENST00000475657 TOX2Q96NM4 488 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms