RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 MYPNQ86TC9 1320 aa18.72■□□□□ 0.59
CPSF3-203ENST00000475482 ABCB5Q2M3G0 1257 aa18.71■□□□□ 0.59
CPSF3-203ENST00000475482 ANKRD13CQ8N6S4 541 aa18.71■□□□□ 0.59
CPSF3-203ENST00000475482 TMOD4Q9NZQ9 345 aa18.71■□□□□ 0.59
CPSF3-203ENST00000475482 MORF4L1Q9UBU8 362 aa18.71■□□□□ 0.59
CPSF3-203ENST00000475482 CYP2D6P10635 497 aa18.7■□□□□ 0.58
CPSF3-203ENST00000475482 PRKCZQ05513 592 aa18.7■□□□□ 0.58
CPSF3-203ENST00000475482 C12orf60Q5U649 245 aa18.7■□□□□ 0.58
CPSF3-203ENST00000475482 TSHZ3Q63HK5 1081 aa18.7■□□□□ 0.58
CPSF3-203ENST00000475482 USP17L2Q6R6M4 530 aa18.7■□□□□ 0.58
CPSF3-203ENST00000475482 PI4K2BQ8TCG2 481 aa18.7■□□□□ 0.58
CPSF3-203ENST00000475482 SH3TC2Q8TF17 1288 aa18.7■□□□□ 0.58
CPSF3-203ENST00000475482 KIAA1683Q9H0B3 1180 aa18.7■□□□□ 0.58
CPSF3-203ENST00000475482 CDC45O75419 566 aa18.69■□□□□ 0.58
CPSF3-203ENST00000475482 ECM2O94769 699 aaPredicted RBP18.69■□□□□ 0.58
CPSF3-203ENST00000475482 STRBPQ96SI9 672 aaKnown RBP18.69■□□□□ 0.58
CPSF3-203ENST00000475482 P2RX7Q99572 595 aaKnown RBP18.69■□□□□ 0.58
CPSF3-203ENST00000475482 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
CPSF3-203ENST00000475482 SWAP70Q9UH65 585 aa18.69■□□□□ 0.58
CPSF3-203ENST00000475482 GABRQQ9UN88 632 aa18.69■□□□□ 0.58
CPSF3-203ENST00000475482 GSPT1P15170 499 aaKnown RBP18.68■□□□□ 0.58
CPSF3-203ENST00000475482 GRK4P32298 578 aa18.68■□□□□ 0.58
CPSF3-203ENST00000475482 IRF5Q13568 498 aa18.68■□□□□ 0.58
CPSF3-203ENST00000475482 POTEEQ6S8J3 1075 aa18.68■□□□□ 0.58
CPSF3-203ENST00000475482 RAET1EQ8TD07 263 aa18.68■□□□□ 0.58
CPSF3-203ENST00000475482 ACER1Q8TDN7 264 aa18.68■□□□□ 0.58
CPSF3-203ENST00000475482 OSBP2Q969R2 916 aa18.68■□□□□ 0.58
CPSF3-203ENST00000475482 TMEM106CQ9BVX2 250 aa18.68■□□□□ 0.58
CPSF3-203ENST00000475482 CABP5Q9NP86 173 aa18.68■□□□□ 0.58
CPSF3-203ENST00000475482 PLXNB2O15031 1838 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 USP17L21D6R901 530 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 SMIM22K7EJ46 135 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 TNPO2O14787 897 aaKnown RBP18.67■□□□□ 0.58
CPSF3-203ENST00000475482 RNF113AO15541 343 aaKnown RBP18.67■□□□□ 0.58
CPSF3-203ENST00000475482 ZFYP08048 801 aaPredicted RBP18.67■□□□□ 0.58
CPSF3-203ENST00000475482 EN2P19622 333 aaPredicted RBP18.67■□□□□ 0.58
CPSF3-203ENST00000475482 FLT3LGP49771 235 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 USP14P54578 494 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 HERVK_113P62684 666 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 IRX3P78415 501 aaPredicted RBP18.67■□□□□ 0.58
CPSF3-203ENST00000475482 RAB3GAP1Q15042 981 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 SLC44A5Q8NCS7 719 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 PXYLP1Q8TE99 480 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 APPBP2Q92624 585 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 DYNLL2Q96FJ2 89 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 SLC4A4Q9Y6R1 1079 aa18.67■□□□□ 0.58
CPSF3-203ENST00000475482 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
CPSF3-203ENST00000475482 SDSP20132 328 aa18.66■□□□□ 0.58
CPSF3-203ENST00000475482 SEPT2Q15019 361 aa18.66■□□□□ 0.58
CPSF3-203ENST00000475482 GIMAP6Q6P9H5 292 aa18.66■□□□□ 0.58
CPSF3-203ENST00000475482 CTR9Q6PD62 1173 aa18.66■□□□□ 0.58
CPSF3-203ENST00000475482 TXNRD2Q9NNW7 524 aa18.66■□□□□ 0.58
CPSF3-203ENST00000475482 RBPJLQ9UBG7 517 aa18.66■□□□□ 0.58
CPSF3-203ENST00000475482 GJD2Q9UKL4 321 aa18.66■□□□□ 0.58
CPSF3-203ENST00000475482 RLFQ13129 1914 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 CYP2D7A0A087X1C5 515 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 A0A1W2PRG0 241 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 GSG1L2A8MUP6 293 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 MTFR1Q15390 333 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 SBK1Q52WX2 424 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 CATSPERGQ6ZRH7 1159 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 TMEM179Q6ZVK1 233 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 C16orf86Q6ZW13 317 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 SIAH1Q8IUQ4 282 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 SLAIN1Q8ND83 568 aa18.65■□□□□ 0.58
CPSF3-203ENST00000475482 GTF3C2Q8WUA4 911 aaPredicted RBP18.65■□□□□ 0.58
CPSF3-203ENST00000475482 GREB1LQ9C091 1923 aaPredicted RBP18.64■□□□□ 0.58
CPSF3-203ENST00000475482 USP17L15C9J2P7 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 USP17L13C9JLJ4 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 USP17L11C9JVI0 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 USP17L18D6R9N7 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 USP17L22D6RA61 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 USP17L17D6RBQ6 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 USP17L19D6RCP7 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 USP17L20D6RJB6 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 VCAM1P19320 739 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 CDK8P49336 464 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 USP17L24Q0WX57 530 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 LBX2Q6XYB7 198 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 COA7Q96BR5 231 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 CCDC17Q96LX7 622 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 FEZ1Q99689 392 aa18.64■□□□□ 0.57
CPSF3-203ENST00000475482 ADCY3O60266 1144 aa18.63■□□□□ 0.57
CPSF3-203ENST00000475482 Q3C1V9 767 aa18.63■□□□□ 0.57
CPSF3-203ENST00000475482 GPRC5AQ8NFJ5 357 aa18.63■□□□□ 0.57
CPSF3-203ENST00000475482 RILPL2Q969X0 211 aa18.63■□□□□ 0.57
CPSF3-203ENST00000475482 DDRGK1Q96HY6 314 aa18.63■□□□□ 0.57
CPSF3-203ENST00000475482 ARPP21Q9UBL0 812 aaPredicted RBP18.63■□□□□ 0.57
CPSF3-203ENST00000475482 GPAA1O43292 621 aa18.62■□□□□ 0.57
CPSF3-203ENST00000475482 PEX10O60683 326 aa18.62■□□□□ 0.57
CPSF3-203ENST00000475482 AKR1B1P15121 316 aa18.62■□□□□ 0.57
CPSF3-203ENST00000475482 ZYXQ15942 572 aaKnown RBP18.62■□□□□ 0.57
CPSF3-203ENST00000475482 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
CPSF3-203ENST00000475482 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
CPSF3-203ENST00000475482 EVI5LQ96CN4 794 aa18.62■□□□□ 0.57
CPSF3-203ENST00000475482 ROBO3Q96MS0 1386 aa18.62■□□□□ 0.57
CPSF3-203ENST00000475482 M0R2C6 588 aa18.61■□□□□ 0.57
CPSF3-203ENST00000475482 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
CPSF3-203ENST00000475482 CNMDO75829 334 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms