RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CNGA1P29973 690 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP5P45974 858 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP17L24Q0WX57 530 aa25■■□□□ 1.59
VPS36-203ENST00000475375 RAB3GAP1Q15042 981 aa25■■□□□ 1.59
VPS36-203ENST00000475375 POTEEQ6S8J3 1075 aa25■■□□□ 1.59
VPS36-203ENST00000475375 DNAH12Q6ZR08 3092 aa25■■□□□ 1.59
VPS36-203ENST00000475375 SURF6O75683 361 aaKnown RBP24.99■■□□□ 1.59
VPS36-203ENST00000475375 IDH1O75874 414 aaKnown RBP24.99■■□□□ 1.59
VPS36-203ENST00000475375 MIGA1Q8NAN2 632 aa24.99■■□□□ 1.59
VPS36-203ENST00000475375 LBHD1Q9BQE6 289 aaPredicted RBP24.99■■□□□ 1.59
VPS36-203ENST00000475375 SENP6Q9GZR1 1112 aaPredicted RBP24.99■■□□□ 1.59
VPS36-203ENST00000475375 CDK5RAP2Q96SN8 1893 aa24.98■■□□□ 1.59
VPS36-203ENST00000475375 BCAR3O75815 825 aa24.98■■□□□ 1.59
VPS36-203ENST00000475375 USP14P54578 494 aa24.98■■□□□ 1.59
VPS36-203ENST00000475375 IVNS1ABPQ9Y6Y0 642 aa24.98■■□□□ 1.59
VPS36-203ENST00000475375 FOCADQ5VW36 1801 aa24.98■■□□□ 1.59
VPS36-203ENST00000475375 CNMDO75829 334 aa24.97■■□□□ 1.59
VPS36-203ENST00000475375 ATP2B2Q01814 1243 aa24.97■■□□□ 1.59
VPS36-203ENST00000475375 POLA2Q14181 598 aa24.97■■□□□ 1.59
VPS36-203ENST00000475375 ZNF512BQ96KM6 892 aaPredicted RBP24.97■■□□□ 1.59
VPS36-203ENST00000475375 C12orf42Q96LP6 360 aa24.97■■□□□ 1.59
VPS36-203ENST00000475375 SERPINB13Q9UIV8 391 aa24.97■■□□□ 1.59
VPS36-203ENST00000475375 UNC80Q8N2C7 3258 aa24.97■■□□□ 1.59
VPS36-203ENST00000475375 LAMA2P24043 3122 aaKnown RBP24.97■■□□□ 1.59
VPS36-203ENST00000475375 SLC15A5A6NIM6 579 aa24.96■■□□□ 1.59
VPS36-203ENST00000475375 IGSF3O75054 1194 aa24.96■■□□□ 1.59
VPS36-203ENST00000475375 FLRT1Q9NZU1 646 aa24.96■■□□□ 1.59
VPS36-203ENST00000475375 VCAM1P19320 739 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 PTPREP23469 700 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 ATN1P54259 1190 aaPredicted RBP24.95■■□□□ 1.58
VPS36-203ENST00000475375 ABCB5Q2M3G0 1257 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 CERKLQ49MI3 558 aaPredicted RBP24.95■■□□□ 1.58
VPS36-203ENST00000475375 TATDN1Q6P1N9 297 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 CATSPERGQ6ZRH7 1159 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 CERS3Q8IU89 383 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 TMEM57Q8N5G2 664 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 MAGEB6Q8N7X4 407 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 CCDC8Q9H0W5 538 aaPredicted RBP24.95■■□□□ 1.58
VPS36-203ENST00000475375 CABP5Q9NP86 173 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 TLR7Q9NYK1 1049 aaKnown RBP24.95■■□□□ 1.58
VPS36-203ENST00000475375 PRKAG2Q9UGJ0 569 aa24.95■■□□□ 1.58
VPS36-203ENST00000475375 DDX20Q9UHI6 824 aaKnown RBP24.95■■□□□ 1.58
VPS36-203ENST00000475375 DBNLQ9UJU6 430 aaKnown RBP24.95■■□□□ 1.58
VPS36-203ENST00000475375 ATP8B2P98198 1209 aa24.94■■□□□ 1.58
VPS36-203ENST00000475375 TTC6Q86TZ1 520 aa24.94■■□□□ 1.58
VPS36-203ENST00000475375 ACER1Q8TDN7 264 aa24.94■■□□□ 1.58
VPS36-203ENST00000475375 SSH3Q8TE77 659 aa24.94■■□□□ 1.58
VPS36-203ENST00000475375 KIAA1683Q9H0B3 1180 aa24.94■■□□□ 1.58
VPS36-203ENST00000475375 C1orf115Q9H7X2 142 aa24.94■■□□□ 1.58
VPS36-203ENST00000475375 MYO5AQ9Y4I1 1855 aaKnown RBP24.94■■□□□ 1.58
VPS36-203ENST00000475375 MSCO60682 206 aa24.93■■□□□ 1.58
VPS36-203ENST00000475375 EHD4Q9H223 541 aa24.93■■□□□ 1.58
VPS36-203ENST00000475375 CYP2C19P33261 490 aa24.92■■□□□ 1.58
VPS36-203ENST00000475375 LPAR1Q92633 364 aa24.92■■□□□ 1.58
VPS36-203ENST00000475375 RPAP3Q9H6T3 665 aaPredicted RBP24.92■■□□□ 1.58
VPS36-203ENST00000475375 BTBD7Q9P203 1132 aa24.92■■□□□ 1.58
VPS36-203ENST00000475375 MYH1P12882 1939 aa24.92■■□□□ 1.58
VPS36-203ENST00000475375 GRB14Q14449 540 aa24.91■■□□□ 1.58
VPS36-203ENST00000475375 ZKSCAN2Q63HK3 967 aa24.91■■□□□ 1.58
VPS36-203ENST00000475375 NPLOC4Q8TAT6 608 aa24.91■■□□□ 1.58
VPS36-203ENST00000475375 FAM161BQ96MY7 647 aa24.91■■□□□ 1.58
VPS36-203ENST00000475375 SPDYE16A6NNV3 312 aaPredicted RBP24.9■■□□□ 1.58
VPS36-203ENST00000475375 DNM1LO00429 736 aa24.9■■□□□ 1.58
VPS36-203ENST00000475375 HOXC6P09630 235 aa24.9■■□□□ 1.58
VPS36-203ENST00000475375 MAP3K12Q12852 859 aa24.9■■□□□ 1.58
VPS36-203ENST00000475375 LBX2Q6XYB7 198 aa24.9■■□□□ 1.58
VPS36-203ENST00000475375 DPP9Q86TI2 863 aa24.9■■□□□ 1.58
VPS36-203ENST00000475375 MYCNP04198 464 aaPredicted RBP24.89■■□□□ 1.58
VPS36-203ENST00000475375 POLR3DP05423 398 aaPredicted RBP24.89■■□□□ 1.58
VPS36-203ENST00000475375 RTP1P59025 263 aa24.89■■□□□ 1.58
VPS36-203ENST00000475375 EAF2Q96CJ1 260 aaPredicted RBP24.89■■□□□ 1.58
VPS36-203ENST00000475375 ATP11BQ9Y2G3 1177 aa24.89■■□□□ 1.58
VPS36-203ENST00000475375 FRMPD3Q5JV73 1810 aa24.89■■□□□ 1.57
VPS36-203ENST00000475375 MPHOSPH10O00566 681 aaKnown RBP24.88■■□□□ 1.57
VPS36-203ENST00000475375 GJC2Q5T442 439 aaPredicted RBP24.88■■□□□ 1.57
VPS36-203ENST00000475375 FAM109BQ6ICB4 259 aaPredicted RBP24.88■■□□□ 1.57
VPS36-203ENST00000475375 TRPV1Q8NER1 839 aa24.88■■□□□ 1.57
VPS36-203ENST00000475375 ANTXR1Q9H6X2 564 aa24.88■■□□□ 1.57
VPS36-203ENST00000475375 POTEB2H3BUK9 544 aa24.87■■□□□ 1.57
VPS36-203ENST00000475375 SHMT1P34896 483 aa24.87■■□□□ 1.57
VPS36-203ENST00000475375 PLCD1P51178 756 aa24.87■■□□□ 1.57
VPS36-203ENST00000475375 SEPT2Q15019 361 aa24.87■■□□□ 1.57
VPS36-203ENST00000475375 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.87■■□□□ 1.57
VPS36-203ENST00000475375 FTSJ3Q8IY81 847 aaKnown RBP24.87■■□□□ 1.57
VPS36-203ENST00000475375 ARRDC4Q8NCT1 418 aa24.87■■□□□ 1.57
VPS36-203ENST00000475375 GUCD1Q96NT3 240 aa24.87■■□□□ 1.57
VPS36-203ENST00000475375 TANGO6Q9C0B7 1094 aa24.87■■□□□ 1.57
VPS36-203ENST00000475375 NOP58Q9Y2X3 529 aaKnown RBP24.87■■□□□ 1.57
VPS36-203ENST00000475375 KBTBD13C9JR72 458 aa24.86■■□□□ 1.57
VPS36-203ENST00000475375 ZNF697Q5TEC3 545 aa24.86■■□□□ 1.57
VPS36-203ENST00000475375 ANO1Q5XXA6 986 aa24.86■■□□□ 1.57
VPS36-203ENST00000475375 CYBAP13498 195 aa24.85■■□□□ 1.57
VPS36-203ENST00000475375 ADORA2AP29274 412 aa24.85■■□□□ 1.57
VPS36-203ENST00000475375 ITPRIPQ8IWB1 547 aa24.85■■□□□ 1.57
VPS36-203ENST00000475375 COL25A1Q9BXS0 654 aaPredicted RBP24.85■■□□□ 1.57
VPS36-203ENST00000475375 MOV10L1Q9BXT6 1211 aaKnown RBP24.85■■□□□ 1.57
VPS36-203ENST00000475375 PRDM5Q9NQX1 630 aaPredicted RBP24.85■■□□□ 1.57
VPS36-203ENST00000475375 HOXC10Q9NYD6 342 aa24.85■■□□□ 1.57
VPS36-203ENST00000475375 MAGEB6P1A0A0J9YX57 407 aa24.84■■□□□ 1.57
VPS36-203ENST00000475375 GUCY1A2P33402 732 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms