RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SSRP1Q08945 709 aaKnown RBP15.99■□□□□ 0.15
TRAF4-210ENST00000475329 TROAPQ12815 778 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 SH3BP5LQ7L8J4 393 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 TRIM22Q8IYM9 498 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 RGS22Q8NE09 1264 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-210ENST00000475329 DPF2Q92785 391 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 MYOZ2Q9NPC6 264 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 GJA3Q9Y6H8 435 aa15.99■□□□□ 0.15
TRAF4-210ENST00000475329 TCP10L2B9ZVM9 353 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 FOSBP53539 338 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 FOXP4Q8IVH2 680 aaPredicted RBP15.98■□□□□ 0.15
TRAF4-210ENST00000475329 PNMA1Q8ND90 353 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 FAM151AQ8WW52 585 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 WASF1Q92558 559 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 PHKBQ93100 1093 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 C8orf76Q96K31 380 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 CCDC17Q96LX7 622 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 MAP3K14Q99558 947 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 SLC26A6Q9BXS9 759 aa15.98■□□□□ 0.15
TRAF4-210ENST00000475329 TOP1P11387 765 aaKnown RBP15.97■□□□□ 0.15
TRAF4-210ENST00000475329 AKR1B1P15121 316 aa15.97■□□□□ 0.15
TRAF4-210ENST00000475329 KIF5BP33176 963 aa15.97■□□□□ 0.15
TRAF4-210ENST00000475329 PPP4R3BQ5MIZ7 849 aa15.97■□□□□ 0.15
TRAF4-210ENST00000475329 METTL16Q86W50 562 aaKnown RBP15.97■□□□□ 0.15
TRAF4-210ENST00000475329 MICALL2Q8IY33 904 aa15.97■□□□□ 0.15
TRAF4-210ENST00000475329 DNAJC18Q9H819 358 aa15.97■□□□□ 0.15
TRAF4-210ENST00000475329 VEZTQ9HBM0 779 aa15.97■□□□□ 0.15
TRAF4-210ENST00000475329 STX8Q9UNK0 236 aa15.97■□□□□ 0.15
TRAF4-210ENST00000475329 CNTNAP1P78357 1384 aa15.97■□□□□ 0.15
TRAF4-210ENST00000475329 IGKV6D-41A0A0C4DH26 115 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 SHTN1A0MZ66 631 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 WNT10BO00744 389 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 NOVP48745 357 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 RESTQ13127 1097 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 GRM4Q14833 912 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 TMTC3Q6ZXV5 915 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 FERMT3Q86UX7 667 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 FAM83AQ86UY5 434 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 CEP95Q96GE4 821 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 CSRNP1Q96S65 589 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 TMEM47Q9BQJ4 181 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 ALG1Q9BT22 464 aa15.96■□□□□ 0.15
TRAF4-210ENST00000475329 RNF26Q9BY78 433 aaPredicted RBP15.96■□□□□ 0.15
TRAF4-210ENST00000475329 ZSCAN16Q9H4T2 348 aaPredicted RBP15.96■□□□□ 0.15
TRAF4-210ENST00000475329 DEXIO95424 95 aa15.95■□□□□ 0.14
TRAF4-210ENST00000475329 YY1P25490 414 aa15.95■□□□□ 0.14
TRAF4-210ENST00000475329 TNNI2P48788 182 aa15.95■□□□□ 0.14
TRAF4-210ENST00000475329 AKAP17AQ02040 695 aaKnown RBP15.95■□□□□ 0.14
TRAF4-210ENST00000475329 NBPF9Q3BBW0 867 aa15.95■□□□□ 0.14
TRAF4-210ENST00000475329 NBPF11Q86T75 865 aa15.95■□□□□ 0.14
TRAF4-210ENST00000475329 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.95■□□□□ 0.14
TRAF4-210ENST00000475329 MTMR4Q9NYA4 1195 aa15.95■□□□□ 0.14
TRAF4-210ENST00000475329 HERC5Q9UII4 1024 aaKnown RBP15.95■□□□□ 0.14
TRAF4-210ENST00000475329 CNOT7Q9UIV1 285 aaKnown RBP15.95■□□□□ 0.14
TRAF4-210ENST00000475329 CNTNAP5Q8WYK1 1306 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 FAM196BA6NMK8 535 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 MPHOSPH10O00566 681 aaKnown RBP15.94■□□□□ 0.14
TRAF4-210ENST00000475329 PLEKHA8P1O95397 391 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 YBX3P16989 372 aaKnown RBP eCLIP15.94■□□□□ 0.141e-7■■□□□ 13.9
TRAF4-210ENST00000475329 GNAQP50148 359 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 GUCY1B3Q02153 619 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 TRIM29Q14134 588 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 FOXD4L6Q3SYB3 417 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-210ENST00000475329 CERKLQ49MI3 558 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-210ENST00000475329 TATDN1Q6P1N9 297 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 FOXD4L3Q6VB84 417 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-210ENST00000475329 GPC2Q8N158 579 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 FBXO18Q8NFZ0 1043 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 CHAMP1Q96JM3 812 aa15.94■□□□□ 0.14
TRAF4-210ENST00000475329 H7C1D1 291 aa15.93■□□□□ 0.14
TRAF4-210ENST00000475329 TTLL1O95922 423 aa15.93■□□□□ 0.14
TRAF4-210ENST00000475329 FUT2Q10981 343 aa15.93■□□□□ 0.14
TRAF4-210ENST00000475329 TNFAIP1Q13829 316 aa15.93■□□□□ 0.14
TRAF4-210ENST00000475329 CSPP1Q1MSJ5 1256 aa15.93■□□□□ 0.14
TRAF4-210ENST00000475329 KIF4BQ2VIQ3 1234 aa15.93■□□□□ 0.14
TRAF4-210ENST00000475329 SKOR2Q2VWA4 1001 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-210ENST00000475329 CMTR1Q8N1G2 835 aaKnown RBP15.93■□□□□ 0.14
TRAF4-210ENST00000475329 BAZ2BQ9UIF8 2168 aaKnown RBP15.92■□□□□ 0.14
TRAF4-210ENST00000475329 PRPF3O43395 683 aaKnown RBP15.92■□□□□ 0.14
TRAF4-210ENST00000475329 NCLP19338 710 aaKnown RBP15.92■□□□□ 0.14
TRAF4-210ENST00000475329 KRT85P78386 507 aa15.92■□□□□ 0.14
TRAF4-210ENST00000475329 RBM26Q5T8P6 1007 aaKnown RBP15.92■□□□□ 0.14
TRAF4-210ENST00000475329 TMEM179Q6ZVK1 233 aa15.92■□□□□ 0.14
TRAF4-210ENST00000475329 CCDC82Q8N4S0 544 aa15.92■□□□□ 0.14
TRAF4-210ENST00000475329 TMEM87AQ8NBN3 555 aa15.92■□□□□ 0.14
TRAF4-210ENST00000475329 AIFM3Q96NN9 605 aa15.92■□□□□ 0.14
TRAF4-210ENST00000475329 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRAF4-210ENST00000475329 LMBRD1Q9NUN5 540 aa15.92■□□□□ 0.14
TRAF4-210ENST00000475329 RNF181Q9P0P0 153 aa15.92■□□□□ 0.14
TRAF4-210ENST00000475329 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
TRAF4-210ENST00000475329 CNPY2Q9Y2B0 182 aa15.92■□□□□ 0.14
TRAF4-210ENST00000475329 TRAK2O60296 914 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 EGFRP00533 1210 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 PARP1P09874 1014 aaKnown RBP15.91■□□□□ 0.14
TRAF4-210ENST00000475329 SLURP2P0DP57 97 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 DNM1Q05193 864 aaKnown RBP15.91■□□□□ 0.14
TRAF4-210ENST00000475329 ABCB5Q2M3G0 1257 aa15.91■□□□□ 0.14
TRAF4-210ENST00000475329 TBC1D10BQ4KMP7 808 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms