RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 USP40Q9NVE5 1235 aa21.14■□□□□ 0.98
SEC61A2-213ENST00000475268 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 DDX60LQ5H9U9 1706 aaKnown RBP21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 A0A1W2PQ27 194 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 A0A1W2PQ64 194 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 A0A1W2PQD8 194 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 ECE2O60344 883 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 ANKS1AQ92625 1134 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 TEKT1Q969V4 418 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 STX8Q9UNK0 236 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 CNTNAP5Q8WYK1 1306 aa21.14■□□□□ 0.97
SEC61A2-213ENST00000475268 MARCKSP29966 332 aaPredicted RBP21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 KIF5BP33176 963 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 NR5A1Q13285 461 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 ENGASEQ8NFI3 743 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 FBXO41Q8TF61 875 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 C7orf43Q8WVR3 580 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 A0A1B0GVL5 298 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 KINO60870 393 aaKnown RBP21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 RBM43Q6ZSC3 357 aaKnown RBP21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 SHISA4Q96DD7 197 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 MAP3K14Q99558 947 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 MYH1P12882 1939 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 MYH6P13533 1939 aa21.13■□□□□ 0.97
SEC61A2-213ENST00000475268 WDHD1O75717 1129 aaPredicted RBP21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 TYRO3Q06418 890 aa21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 AOC3Q16853 763 aa21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 HHIPL2Q6UWX4 724 aa21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 OXER1Q8TDS5 423 aa21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 TRIM44Q96DX7 344 aaPredicted RBP21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 DDX4Q9NQI0 724 aaKnown RBP21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 KIAA0825Q8IV33 1275 aa21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 PIBF1Q8WXW3 757 aa21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 MTMR7Q9Y216 660 aa21.12■□□□□ 0.97
SEC61A2-213ENST00000475268 SNED1Q8TER0 1413 aa21.11■□□□□ 0.97
SEC61A2-213ENST00000475268 NDUFA8P51970 172 aa21.11■□□□□ 0.97
SEC61A2-213ENST00000475268 PTPAQ15257 358 aa21.11■□□□□ 0.97
SEC61A2-213ENST00000475268 CDC42EP5Q6NZY7 148 aa21.11■□□□□ 0.97
SEC61A2-213ENST00000475268 TMEM47Q9BQJ4 181 aa21.11■□□□□ 0.97
SEC61A2-213ENST00000475268 C21orf2O43822 256 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 CRKP46108 304 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 UVSSAQ2YD98 709 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 AXDND1Q5T1B0 1012 aaPredicted RBP21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 APOBEC3HQ6NTF7 200 aaKnown RBP21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 JMYQ8N9B5 988 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 NEDD1Q8NHV4 660 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 PHF20Q9BVI0 1012 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 FOCADQ5VW36 1801 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 PPP6R2O75170 966 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 DACT2Q5SW24 774 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 SASS6Q6UVJ0 657 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 FMR1NBQ8N0W7 255 aaPredicted RBP21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 MRVI1Q9Y6F6 885 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 ADAMTSL1Q8N6G6 1762 aa21.1■□□□□ 0.97
SEC61A2-213ENST00000475268 CTAGE5O15320 804 aa21.09■□□□□ 0.97
SEC61A2-213ENST00000475268 TOB1P50616 345 aaPredicted RBP21.09■□□□□ 0.97
SEC61A2-213ENST00000475268 RILPL1Q5EBL4 403 aa21.09■□□□□ 0.97
SEC61A2-213ENST00000475268 STAG2Q8N3U4 1231 aa21.09■□□□□ 0.97
SEC61A2-213ENST00000475268 KRT2P35908 639 aa21.09■□□□□ 0.97
SEC61A2-213ENST00000475268 GRM4Q14833 912 aa21.09■□□□□ 0.97
SEC61A2-213ENST00000475268 CC2D2BQ6DHV5 1058 aa21.09■□□□□ 0.97
SEC61A2-213ENST00000475268 CABP5Q9NP86 173 aa21.09■□□□□ 0.97
SEC61A2-213ENST00000475268 GOLGB1Q14789 3259 aaKnown RBP21.08■□□□□ 0.97
SEC61A2-213ENST00000475268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.08■□□□□ 0.97
SEC61A2-213ENST00000475268 SCG2P13521 617 aa21.08■□□□□ 0.97
SEC61A2-213ENST00000475268 KIAA2012Q0VF49 1180 aa21.08■□□□□ 0.97
SEC61A2-213ENST00000475268 PDLIM2Q96JY6 352 aa21.08■□□□□ 0.97
SEC61A2-213ENST00000475268 MAD2L2Q9UI95 211 aa21.08■□□□□ 0.97
SEC61A2-213ENST00000475268 CMA1P23946 247 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 RBM5P52756 815 aaKnown RBP eCLIP21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 SUPT20HQ8NEM7 779 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 CEP95Q96GE4 821 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 ZDHHC15Q96MV8 337 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 PCDHAC2Q9Y5I4 1007 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 C10orf71Q711Q0 1435 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 ATP2B1P20020 1258 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 FKBP1AP62942 108 aaKnown RBP21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 PFKFB3Q16875 520 aaPredicted RBP21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 ANO6Q4KMQ2 910 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 TTLL6Q8N841 843 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 OSBPL5Q9H0X9 879 aaPredicted RBP21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 BRMS1Q9HCU9 246 aa21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.07■□□□□ 0.96
SEC61A2-213ENST00000475268 SCN9AQ15858 1988 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 PPIP5K2O43314 1243 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 GNAQP50148 359 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 GABPAQ06546 454 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 NFIAQ12857 509 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 SDF4Q9BRK5 362 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 VEGFAP15692 232 aaPredicted RBP21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 PFKFB1P16118 471 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 CLIC6Q96NY7 704 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 RTN4Q9NQC3 1192 aaKnown RBP21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 SERPINB13Q9UIV8 391 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 PCDHB6Q9Y5E3 794 aa21.06■□□□□ 0.96
SEC61A2-213ENST00000475268 BAZ2BQ9UIF8 2168 aaKnown RBP21.05■□□□□ 0.96
SEC61A2-213ENST00000475268 FAM200AQ8TCP9 573 aa21.05■□□□□ 0.96
SEC61A2-213ENST00000475268 MRIQ9BWK5 157 aa21.05■□□□□ 0.96
SEC61A2-213ENST00000475268 USP25Q9UHP3 1055 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms