RNA–Protein interactions for RNA: ENST00000475074.1

IMP4-214, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-214ENST00000475074 COL9A3Q14050 684 aaPredicted RBP12.96□□□□□ -0.33
IMP4-214ENST00000475074 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.33
IMP4-214ENST00000475074 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
IMP4-214ENST00000475074 ARMC9Q7Z3E5 817 aa12.96□□□□□ -0.33
IMP4-214ENST00000475074 HSCBQ8IWL3 235 aa12.96□□□□□ -0.33
IMP4-214ENST00000475074 SCYL3Q8IZE3 742 aa12.96□□□□□ -0.33
IMP4-214ENST00000475074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.96□□□□□ -0.33
IMP4-214ENST00000475074 NKX2-3Q8TAU0 364 aa12.96□□□□□ -0.33
IMP4-214ENST00000475074 CEP95Q96GE4 821 aa12.96□□□□□ -0.33
IMP4-214ENST00000475074 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.33
IMP4-214ENST00000475074 SH2D4AQ9H788 454 aa12.96□□□□□ -0.33
IMP4-214ENST00000475074 ZBTB21Q9ULJ3 1066 aa12.96□□□□□ -0.33
IMP4-214ENST00000475074 FAM196BA6NMK8 535 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 KIF3CO14782 793 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
IMP4-214ENST00000475074 DDAH1O94760 285 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 ITGBL1O95965 494 aaPredicted RBP12.95□□□□□ -0.34
IMP4-214ENST00000475074 GH2P01242 217 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 CHST3Q7LGC8 479 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 CATIPQ7Z7H3 387 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 ANKRD13AQ8IZ07 590 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 RBM46Q8TBY0 533 aaKnown RBP12.95□□□□□ -0.34
IMP4-214ENST00000475074 WRNIP1Q96S55 665 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 WDR18Q9BV38 432 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 KAT14Q9H8E8 782 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 AS3MTQ9HBK9 375 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 ARHGEF10LQ9HCE6 1279 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 STX8Q9UNK0 236 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
IMP4-214ENST00000475074 SLC12A7Q9Y666 1083 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 DOCK1Q14185 1865 aa12.95□□□□□ -0.34
IMP4-214ENST00000475074 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 CCDC196A0A1B0GTZ2 297 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 USP17L5A8MUK1 530 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 PFKFB2O60825 505 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 TOMM70O94826 608 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 GUCY1A2P33402 732 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 ICA1Q05084 483 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
IMP4-214ENST00000475074 SEPT2Q15019 361 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 LDLRAD1Q5T700 205 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 APOA5Q6Q788 366 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 NFXL1Q6ZNB6 911 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 ZNF526Q8TF50 670 aaPredicted RBP12.94□□□□□ -0.34
IMP4-214ENST00000475074 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
IMP4-214ENST00000475074 TCEANC2Q96MN5 208 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 TMEM47Q9BQJ4 181 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 ZKSCAN3Q9BRR0 538 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 LRRC2Q9BYS8 371 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 PICK1Q9NRD5 415 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 ATAD5Q96QE3 1844 aa12.94□□□□□ -0.34
IMP4-214ENST00000475074 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 ZBTB43O43298 467 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 NMT2O60551 498 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 GDF11O95390 407 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
IMP4-214ENST00000475074 PDIA3P30101 505 aaKnown RBP12.93□□□□□ -0.34
IMP4-214ENST00000475074 INPP5BP32019 993 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 APOBRQ0VD83 1088 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 TROAPQ12815 778 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 FSTL1Q12841 308 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 CUL4AQ13619 759 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 ZNF654Q8IZM8 581 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 PNMA1Q8ND90 353 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 GMCL1P1Q8NEA9 526 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 TMX3Q96JJ7 454 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
IMP4-214ENST00000475074 RBM28Q9NW13 759 aaKnown RBP12.93□□□□□ -0.34
IMP4-214ENST00000475074 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 CSADQ9Y600 493 aa12.93□□□□□ -0.34
IMP4-214ENST00000475074 PASKQ96RG2 1323 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 SLURP2P0DP57 97 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 SNHG28P0DPA3 235 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 EEF2P13639 858 aaKnown RBP12.92□□□□□ -0.34
IMP4-214ENST00000475074 PTPRAP18433 802 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 YY1P25490 414 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 SMARCA1P28370 1054 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 KIF5BP33176 963 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 GNAQP50148 359 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 JAG1P78504 1218 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 ME3Q16798 604 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.92□□□□□ -0.34
IMP4-214ENST00000475074 SIAH1Q8IUQ4 282 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 FANCBQ8NB91 859 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 SLKQ9H2G2 1235 aaPredicted RBP12.92□□□□□ -0.34
IMP4-214ENST00000475074 CLIP2Q9UDT6 1046 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 BRPF3Q9ULD4 1205 aa12.92□□□□□ -0.34
IMP4-214ENST00000475074 TRPM7Q96QT4 1865 aa12.91□□□□□ -0.34
IMP4-214ENST00000475074 C19orf81C9J6K1 198 aa12.91□□□□□ -0.34
IMP4-214ENST00000475074 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.34
IMP4-214ENST00000475074 USP14P54578 494 aa12.91□□□□□ -0.34
IMP4-214ENST00000475074 PPATQ06203 517 aa12.91□□□□□ -0.34
IMP4-214ENST00000475074 GPATCH4Q5T3I0 446 aaKnown RBP12.91□□□□□ -0.34
IMP4-214ENST00000475074 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
IMP4-214ENST00000475074 ERO1BQ86YB8 467 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms