RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SLC45A1Q9Y2W3 748 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 PCDHB15Q9Y5E8 787 aa11.39□□□□□ -0.59
PDPN-204ENST00000475043 MYCP01106 439 aaPredicted RBP11.38□□□□□ -0.59
PDPN-204ENST00000475043 BCRP11274 1271 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 HOXD10P28358 340 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 CTGFP29279 349 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 ADD2P35612 726 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 PLCD1P51178 756 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 FCGRTP55899 365 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.59
PDPN-204ENST00000475043 ZSCAN25Q6NSZ9 544 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 LCORLQ8N3X6 602 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 TRIM47Q96LD4 638 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 CRBNQ96SW2 442 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 WDR18Q9BV38 432 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 EHD4Q9H223 541 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 ARMT1Q9H993 441 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 GINM1Q9NU53 330 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 TMOD4Q9NZQ9 345 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 ZBTB21Q9ULJ3 1066 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 MYH8P13535 1937 aa11.38□□□□□ -0.59
PDPN-204ENST00000475043 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
PDPN-204ENST00000475043 USP17L10C9JJH3 530 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 MBD4O95243 580 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 GH2P01242 217 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 CHGBP05060 677 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 OSBPP22059 807 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 PRMT2P55345 433 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 BACE1P56817 501 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 RAB3GAP1Q15042 981 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
PDPN-204ENST00000475043 TSHZ3Q63HK5 1081 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 ANKRD13CQ8N6S4 541 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 RAET1EQ8TD07 263 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 SH3TC2Q8TF17 1288 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 ARMC5Q96C12 935 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 DCP1AQ9NPI6 582 aaPredicted RBP11.37□□□□□ -0.59
PDPN-204ENST00000475043 SRRDQ9UH36 339 aa11.37□□□□□ -0.59
PDPN-204ENST00000475043 MYPNQ86TC9 1320 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 RBBP6Q7Z6E9 1792 aaKnown RBP11.36□□□□□ -0.59
PDPN-204ENST00000475043 C19orf81C9J6K1 198 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 UBE3CQ15386 1083 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
PDPN-204ENST00000475043 ABCB5Q2M3G0 1257 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 SH3D19Q5HYK7 790 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 TATDN1Q6P1N9 297 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 FEZ1Q99689 392 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 ASCC2Q9H1I8 757 aaPredicted RBP11.36□□□□□ -0.59
PDPN-204ENST00000475043 CABP5Q9NP86 173 aa11.36□□□□□ -0.59
PDPN-204ENST00000475043 CENPFP49454 3210 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 MPHOSPH10O00566 681 aaKnown RBP11.35□□□□□ -0.59
PDPN-204ENST00000475043 TNPO2O14787 897 aaKnown RBP11.35□□□□□ -0.59
PDPN-204ENST00000475043 PRKAB2O43741 272 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 SHMT1P34896 483 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 IRX3P78415 501 aaPredicted RBP11.35□□□□□ -0.59
PDPN-204ENST00000475043 PRKCZQ05513 592 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 ZNF333Q96JL9 665 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 STK24Q9Y6E0 443 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 SLC4A4Q9Y6R1 1079 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 HTTP42858 3142 aa11.35□□□□□ -0.59
PDPN-204ENST00000475043 CYP2D6P10635 497 aa11.34□□□□□ -0.59
PDPN-204ENST00000475043 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
PDPN-204ENST00000475043 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
PDPN-204ENST00000475043 USP17L2Q6R6M4 530 aa11.34□□□□□ -0.59
PDPN-204ENST00000475043 KBTBD3Q8NAB2 608 aa11.34□□□□□ -0.59
PDPN-204ENST00000475043 PUS7LQ9H0K6 701 aaKnown RBP11.34□□□□□ -0.59
PDPN-204ENST00000475043 ATP8A2Q9NTI2 1148 aa11.34□□□□□ -0.59
PDPN-204ENST00000475043 BIN2Q9UBW5 565 aaPredicted RBP11.34□□□□□ -0.59
PDPN-204ENST00000475043 GABRQQ9UN88 632 aa11.34□□□□□ -0.59
PDPN-204ENST00000475043 TTC41PQ6P2S7 1318 aa11.34□□□□□ -0.59
PDPN-204ENST00000475043 STK25O00506 426 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 ERC2O15083 957 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 EN2P19622 333 aaPredicted RBP11.33□□□□□ -0.6
PDPN-204ENST00000475043 GRK4P32298 578 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 GABPAQ06546 454 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 ANKRD45Q5TZF3 282 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 SLC44A5Q8NCS7 719 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 COA7Q96BR5 231 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 DYNLL2Q96FJ2 89 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
PDPN-204ENST00000475043 TNRC18O15417 2968 aaPredicted RBP11.33□□□□□ -0.6
PDPN-204ENST00000475043 CYP2D7A0A087X1C5 515 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 USP17L12C9JPN9 530 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 USP17L21D6R901 530 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 RNF113AO15541 343 aaKnown RBP11.32□□□□□ -0.6
PDPN-204ENST00000475043 MX1P20591 662 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
PDPN-204ENST00000475043 FLT3LGP49771 235 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 USP14P54578 494 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 HERVK_113P62684 666 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 SEPT2Q15019 361 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 LRRFIP1Q32MZ4 808 aaKnown RBP11.32□□□□□ -0.6
PDPN-204ENST00000475043 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
PDPN-204ENST00000475043 OTUD7AQ8TE49 926 aaPredicted RBP11.32□□□□□ -0.6
PDPN-204ENST00000475043 P2RX7Q99572 595 aaKnown RBP11.32□□□□□ -0.6
PDPN-204ENST00000475043 SWAP70Q9UH65 585 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms