RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 USP17L20D6RJB6 530 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 CCND3P30281 292 aaPredicted RBP19.03■□□□□ 0.64
SRRT-209ENST00000474896 USP17L24Q0WX57 530 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 RAB3GAP1Q15042 981 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 CERS3Q8IU89 383 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 FEZ1Q99689 392 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 ANTXR1Q9H6X2 564 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 SERPINB13Q9UIV8 391 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 MYH1P12882 1939 aa19.03■□□□□ 0.64
SRRT-209ENST00000474896 DDX60LQ5H9U9 1706 aaKnown RBP19.03■□□□□ 0.64
SRRT-209ENST00000474896 CNMDO75829 334 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 RLBP1P12271 317 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 MAP3K12Q12852 859 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 CERKLQ49MI3 558 aaPredicted RBP19.02■□□□□ 0.64
SRRT-209ENST00000474896 LHX8Q68G74 356 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 CATSPERGQ6ZRH7 1159 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 TTC6Q86TZ1 520 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 SLC17A8Q8NDX2 589 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 C12orf42Q96LP6 360 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 RABGAP1Q9Y3P9 1069 aa19.02■□□□□ 0.64
SRRT-209ENST00000474896 PFASO15067 1338 aa19.01■□□□□ 0.63
SRRT-209ENST00000474896 MAGEA10P43363 369 aaPredicted RBP19.01■□□□□ 0.63
SRRT-209ENST00000474896 ABCB5Q2M3G0 1257 aa19.01■□□□□ 0.63
SRRT-209ENST00000474896 ACER1Q8TDN7 264 aa19.01■□□□□ 0.63
SRRT-209ENST00000474896 EDC3Q96F86 508 aaKnown RBP19.01■□□□□ 0.63
SRRT-209ENST00000474896 APBA2Q99767 749 aa19.01■□□□□ 0.63
SRRT-209ENST00000474896 EHD4Q9H223 541 aa19.01■□□□□ 0.63
SRRT-209ENST00000474896 CABP5Q9NP86 173 aa19.01■□□□□ 0.63
SRRT-209ENST00000474896 PLCD1P51178 756 aa19■□□□□ 0.63
SRRT-209ENST00000474896 USP14P54578 494 aa19■□□□□ 0.63
SRRT-209ENST00000474896 CCNA1P78396 465 aa19■□□□□ 0.63
SRRT-209ENST00000474896 MAP2K5Q13163 448 aa19■□□□□ 0.63
SRRT-209ENST00000474896 WDR78Q5VTH9 848 aa19■□□□□ 0.63
SRRT-209ENST00000474896 AACSQ86V21 672 aa19■□□□□ 0.63
SRRT-209ENST00000474896 KIAA1683Q9H0B3 1180 aa19■□□□□ 0.63
SRRT-209ENST00000474896 GLRX3O76003 335 aaKnown RBP18.99■□□□□ 0.63
SRRT-209ENST00000474896 COL6A1P12109 1028 aa18.99■□□□□ 0.63
SRRT-209ENST00000474896 CEP85Q6P2H3 762 aa18.99■□□□□ 0.63
SRRT-209ENST00000474896 EXOC6BQ9Y2D4 811 aa18.99■□□□□ 0.63
SRRT-209ENST00000474896 SLC15A5A6NIM6 579 aa18.98■□□□□ 0.63
SRRT-209ENST00000474896 POLR3DP05423 398 aaPredicted RBP18.98■□□□□ 0.63
SRRT-209ENST00000474896 VCAM1P19320 739 aa18.98■□□□□ 0.63
SRRT-209ENST00000474896 PTPREP23469 700 aa18.98■□□□□ 0.63
SRRT-209ENST00000474896 SHMT1P34896 483 aa18.98■□□□□ 0.63
SRRT-209ENST00000474896 MFSD14CQ5VZR4 134 aa18.98■□□□□ 0.63
SRRT-209ENST00000474896 TMED8Q6PL24 325 aaPredicted RBP18.98■□□□□ 0.63
SRRT-209ENST00000474896 ERC1Q8IUD2 1116 aa18.98■□□□□ 0.63
SRRT-209ENST00000474896 UBE2OQ9C0C9 1292 aaKnown RBP18.98■□□□□ 0.63
SRRT-209ENST00000474896 FLRT1Q9NZU1 646 aa18.98■□□□□ 0.63
SRRT-209ENST00000474896 BTBD7Q9P203 1132 aa18.98■□□□□ 0.63
SRRT-209ENST00000474896 MAGEB6P1A0A0J9YX57 407 aa18.97■□□□□ 0.63
SRRT-209ENST00000474896 GUCY1A2P33402 732 aa18.97■□□□□ 0.63
SRRT-209ENST00000474896 LRRC26Q2I0M4 334 aa18.97■□□□□ 0.63
SRRT-209ENST00000474896 LRIT3Q3SXY7 679 aa18.97■□□□□ 0.63
SRRT-209ENST00000474896 GPR153Q6NV75 609 aa18.97■□□□□ 0.63
SRRT-209ENST00000474896 TDHQ8IZJ6 230 aa18.97■□□□□ 0.63
SRRT-209ENST00000474896 RIOK1Q9BRS2 568 aaKnown RBP18.97■□□□□ 0.63
SRRT-209ENST00000474896 RPAP3Q9H6T3 665 aaPredicted RBP18.97■□□□□ 0.63
SRRT-209ENST00000474896 LAMA3Q16787 3333 aa18.96■□□□□ 0.63
SRRT-209ENST00000474896 ATP2B2Q01814 1243 aa18.96■□□□□ 0.63
SRRT-209ENST00000474896 LBX2Q6XYB7 198 aa18.96■□□□□ 0.63
SRRT-209ENST00000474896 DEFB123Q8N688 67 aa18.96■□□□□ 0.63
SRRT-209ENST00000474896 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
SRRT-209ENST00000474896 IVNS1ABPQ9Y6Y0 642 aa18.96■□□□□ 0.63
SRRT-209ENST00000474896 SPDYE16A6NNV3 312 aaPredicted RBP18.95■□□□□ 0.62
SRRT-209ENST00000474896 DLL1O00548 723 aa18.95■□□□□ 0.62
SRRT-209ENST00000474896 CNGA1P29973 690 aa18.95■□□□□ 0.62
SRRT-209ENST00000474896 SEPT2Q15019 361 aa18.95■□□□□ 0.62
SRRT-209ENST00000474896 TTF1Q15361 905 aaPredicted RBP18.95■□□□□ 0.62
SRRT-209ENST00000474896 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
SRRT-209ENST00000474896 NPLOC4Q8TAT6 608 aa18.95■□□□□ 0.62
SRRT-209ENST00000474896 SENP6Q9GZR1 1112 aaPredicted RBP18.95■□□□□ 0.62
SRRT-209ENST00000474896 MCM9Q9NXL9 1143 aa18.95■□□□□ 0.62
SRRT-209ENST00000474896 MPHOSPH10O00566 681 aaKnown RBP18.94■□□□□ 0.62
SRRT-209ENST00000474896 EVX2Q03828 476 aa18.94■□□□□ 0.62
SRRT-209ENST00000474896 GABPAQ06546 454 aa18.94■□□□□ 0.62
SRRT-209ENST00000474896 Q7L0L9 218 aa18.94■□□□□ 0.62
SRRT-209ENST00000474896 RHPN1Q8TCX5 695 aa18.94■□□□□ 0.62
SRRT-209ENST00000474896 CRNKL1Q9BZJ0 848 aaKnown RBP18.94■□□□□ 0.62
SRRT-209ENST00000474896 A0A1W2PRG0 241 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 HOXC6P09630 235 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 PDE6AP16499 860 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 CYP2C19P33261 490 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 MDM2Q00987 491 aaPredicted RBP18.93■□□□□ 0.62
SRRT-209ENST00000474896 GRB14Q14449 540 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 COG2Q14746 738 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 HSP90AB4PQ58FF6 505 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 HOXC10Q9NYD6 342 aa18.93■□□□□ 0.62
SRRT-209ENST00000474896 DDX20Q9UHI6 824 aaKnown RBP18.93■□□□□ 0.62
SRRT-209ENST00000474896 DPP9Q86TI2 863 aa18.92■□□□□ 0.62
SRRT-209ENST00000474896 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
SRRT-209ENST00000474896 ZNF532Q9HCE3 1301 aa18.92■□□□□ 0.62
SRRT-209ENST00000474896 APBB1O00213 710 aa18.91■□□□□ 0.62
SRRT-209ENST00000474896 GOLIM4O00461 696 aa18.91■□□□□ 0.62
SRRT-209ENST00000474896 MSCO60682 206 aa18.91■□□□□ 0.62
SRRT-209ENST00000474896 CLASRPQ8N2M8 674 aaKnown RBP18.91■□□□□ 0.62
SRRT-209ENST00000474896 TRPV1Q8NER1 839 aa18.91■□□□□ 0.62
SRRT-209ENST00000474896 SDR42E1Q8WUS8 393 aa18.91■□□□□ 0.62
SRRT-209ENST00000474896 LPAR1Q92633 364 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms