RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FOXP4Q8IVH2 680 aaPredicted RBP8.35□□□□□ -1.07
LIMD1-204ENST00000474665 CNKSR2Q8WXI2 1034 aa8.35□□□□□ -1.07
LIMD1-204ENST00000474665 ZKSCAN4Q969J2 545 aaPredicted RBP8.35□□□□□ -1.07
LIMD1-204ENST00000474665 WNK4Q96J92 1243 aa8.35□□□□□ -1.07
LIMD1-204ENST00000474665 LSG1Q9H089 658 aaKnown RBP8.35□□□□□ -1.07
LIMD1-204ENST00000474665 EHD4Q9H223 541 aa8.35□□□□□ -1.07
LIMD1-204ENST00000474665 SERPINB13Q9UIV8 391 aa8.35□□□□□ -1.07
LIMD1-204ENST00000474665 ZMYND8Q9ULU4 1186 aaPredicted RBP8.35□□□□□ -1.07
LIMD1-204ENST00000474665 SNCAIPQ9Y6H5 919 aa8.35□□□□□ -1.07
LIMD1-204ENST00000474665 ROBO3Q96MS0 1386 aa8.35□□□□□ -1.07
LIMD1-204ENST00000474665 DOCK1Q14185 1865 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 ZMYM6O95789 1325 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 PPP1R12BO60237 982 aaPredicted RBP8.34□□□□□ -1.07
LIMD1-204ENST00000474665 APPP05067 770 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 POLR3DP05423 398 aaPredicted RBP8.34□□□□□ -1.07
LIMD1-204ENST00000474665 CCL5P13501 91 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
LIMD1-204ENST00000474665 VGLL4Q14135 290 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 OTUD7BQ6GQQ9 843 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 TATDN1Q6P1N9 297 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 C16orf86Q6ZW13 317 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
LIMD1-204ENST00000474665 TDHQ8IZJ6 230 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 MAP4K1Q92918 833 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 WRNIP1Q96S55 665 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 DSCC1Q9BVC3 393 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
LIMD1-204ENST00000474665 ZNF341Q9BYN7 854 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 HERC5Q9UII4 1024 aaKnown RBP8.34□□□□□ -1.07
LIMD1-204ENST00000474665 ANAPC4Q9UJX5 808 aa8.34□□□□□ -1.07
LIMD1-204ENST00000474665 MINDY4BA8MYZ0 360 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 POTEB2H3BUK9 544 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 GJB1P08034 283 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 FGRP09769 529 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 ZBTB48P10074 688 aaPredicted RBP8.33□□□□□ -1.08
LIMD1-204ENST00000474665 GUCY1A2P33402 732 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 CAP2P40123 477 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 IREB2P48200 963 aaKnown RBP8.33□□□□□ -1.08
LIMD1-204ENST00000474665 TDO2P48775 406 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 CDK8P49336 464 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 HAND2P61296 217 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 MAP3K9P80192 1104 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 CTDSPL2Q05D32 466 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 PPARAQ07869 468 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 NOL9Q5SY16 702 aaKnown RBP8.33□□□□□ -1.08
LIMD1-204ENST00000474665 DCAF15Q66K64 600 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 TTC6Q86TZ1 520 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 TBC1D10CQ8IV04 446 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 MAFAQ8NHW3 353 aaPredicted RBP8.33□□□□□ -1.08
LIMD1-204ENST00000474665 RUFY2Q8WXA3 655 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 TTC28Q96AY4 2481 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 RNF208Q9H0X6 261 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 NAPBQ9H115 298 aa8.33□□□□□ -1.08
LIMD1-204ENST00000474665 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.33□□□□□ -1.08
LIMD1-204ENST00000474665 ARPP21Q9UBL0 812 aaPredicted RBP8.33□□□□□ -1.08
LIMD1-204ENST00000474665 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
LIMD1-204ENST00000474665 CTNND1O60716 968 aaKnown RBP8.32□□□□□ -1.08
LIMD1-204ENST00000474665 PRDM1O75626 825 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 GDF11O95390 407 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 SEC24BO95487 1268 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 HLA-DOAP06340 250 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 AKR1B1P15121 316 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 SYN1P17600 705 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 RASA1P20936 1047 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 MAGEA10P43363 369 aaPredicted RBP8.32□□□□□ -1.08
LIMD1-204ENST00000474665 C8orf34Q49A92 452 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 STOX1Q6ZVD7 989 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 SIAH1Q8IUQ4 282 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 ANKRD13AQ8IZ07 590 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 C7orf61Q8IZ16 206 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 STK11IPQ8N1F8 1099 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 U2AF1L4Q8WU68 220 aaKnown RBP8.32□□□□□ -1.08
LIMD1-204ENST00000474665 HOOK2Q96ED9 719 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 NACAP1Q9BZK3 213 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 ELP3Q9H9T3 547 aa8.32□□□□□ -1.08
LIMD1-204ENST00000474665 RBM8AQ9Y5S9 174 aaKnown RBP8.32□□□□□ -1.08
LIMD1-204ENST00000474665 SPDYE5A6NIY4 337 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 UNCXA6NJT0 531 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 GH2P01242 217 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 CYP21A2P08686 494 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 PTPRAP18433 802 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 MFAP1P55081 439 aaKnown RBP8.31□□□□□ -1.08
LIMD1-204ENST00000474665 MOGSQ13724 837 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 NECTIN1Q15223 517 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 FAM109BQ6ICB4 259 aaPredicted RBP8.31□□□□□ -1.08
LIMD1-204ENST00000474665 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 RASEFQ8IZ41 740 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 SCYL3Q8IZE3 742 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 CRACR2BQ8N4Y2 399 aaPredicted RBP8.31□□□□□ -1.08
LIMD1-204ENST00000474665 DDRGK1Q96HY6 314 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 MS4A4AQ96JQ5 239 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 CDX2Q99626 313 aaPredicted RBP8.31□□□□□ -1.08
LIMD1-204ENST00000474665 ZBTB21Q9ULJ3 1066 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 ZSWIM8A7E2V4 1837 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 MYH4Q9Y623 1939 aa8.31□□□□□ -1.08
LIMD1-204ENST00000474665 NEDD4P46934 1319 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 SYNGAP1Q96PV0 1343 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 BAZ2BQ9UIF8 2168 aaKnown RBP8.3□□□□□ -1.08
LIMD1-204ENST00000474665 IGKV6D-41A0A0C4DH26 115 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 TESPA1A2RU30 521 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms