RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 TSPY2A6NKD2 308 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-206ENST00000474648 NMT2O60551 498 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 CTNND1O60716 968 aaKnown RBP11.8□□□□□ -0.52
COL8A1-206ENST00000474648 TOMM70O94826 608 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 GH2P01242 217 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 NF2P35240 595 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 NEK4P51957 841 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 SEC23AQ15436 765 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 LDLRAD1Q5T700 205 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 RCSD1Q6JBY9 416 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-206ENST00000474648 FBXL16Q8N461 479 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 ANKS1AQ92625 1134 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 ZKSCAN4Q969J2 545 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-206ENST00000474648 ZSCAN10Q96SZ4 725 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-206ENST00000474648 ZKSCAN3Q9BRR0 538 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 MTA3Q9BTC8 594 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 LRRC2Q9BYS8 371 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 PDRG1Q9NUG6 133 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 ANGEL1Q9UNK9 670 aaKnown RBP11.8□□□□□ -0.52
COL8A1-206ENST00000474648 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 PASKQ96RG2 1323 aa11.8□□□□□ -0.52
COL8A1-206ENST00000474648 UBE2Q2LH0YL09 131 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 SH2B2O14492 632 aaPredicted RBP11.79□□□□□ -0.52
COL8A1-206ENST00000474648 CELF2O95319 508 aaKnown RBP11.79□□□□□ -0.52
COL8A1-206ENST00000474648 SEPT2Q15019 361 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 NOL9Q5SY16 702 aaKnown RBP11.79□□□□□ -0.52
COL8A1-206ENST00000474648 Q6ZUG5 572 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 TMEM179Q6ZVK1 233 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 WRNIP1Q96S55 665 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 AGXT2Q9BYV1 514 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 GINM1Q9NU53 330 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 MTMR4Q9NYA4 1195 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.79□□□□□ -0.52
COL8A1-206ENST00000474648 ZBTB21Q9ULJ3 1066 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 PLIN4Q96Q06 1357 aa11.79□□□□□ -0.52
COL8A1-206ENST00000474648 MPHOSPH10O00566 681 aaKnown RBP11.78□□□□□ -0.52
COL8A1-206ENST00000474648 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
COL8A1-206ENST00000474648 IREB2P48200 963 aaKnown RBP11.78□□□□□ -0.52
COL8A1-206ENST00000474648 TOB2Q14106 344 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-206ENST00000474648 ARMC9Q7Z3E5 817 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 DGKHQ86XP1 1220 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 SCYL3Q8IZE3 742 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-206ENST00000474648 TMEM87BQ96K49 555 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 ZNF408Q9H9D4 720 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 GBA2Q9HCG7 927 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-206ENST00000474648 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 SNCAIPQ9Y6H5 919 aa11.78□□□□□ -0.52
COL8A1-206ENST00000474648 LAMA4Q16363 1823 aa11.77□□□□□ -0.52
COL8A1-206ENST00000474648 CD2BP2O95400 341 aaKnown RBP11.77□□□□□ -0.53
COL8A1-206ENST00000474648 ASNSP08243 561 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 LIFRP42702 1097 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 AK2P54819 239 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 FKBP1BP68106 108 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 FSTL1Q12841 308 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 VGLL4Q14135 290 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 CCDC178Q5BJE1 867 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 TMEM67Q5HYA8 995 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.53
COL8A1-206ENST00000474648 IQCA1Q86XH1 822 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 CLEC10AQ8IUN9 316 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 C2orf69Q8N8R5 385 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 MKL1Q969V6 931 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 CLMNQ96JQ2 1002 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
COL8A1-206ENST00000474648 UBAC1Q9BSL1 405 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 KANSL2Q9H9L4 492 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 NYAP2Q9P242 653 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 TNKSO95271 1327 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 LAMB1P07942 1786 aa11.77□□□□□ -0.53
COL8A1-206ENST00000474648 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 UNCXA6NJT0 531 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 EEF2P13639 858 aaKnown RBP11.76□□□□□ -0.53
COL8A1-206ENST00000474648 PTPRAP18433 802 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 EVCP57679 992 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 TTLL12Q14166 644 aaPredicted RBP11.76□□□□□ -0.53
COL8A1-206ENST00000474648 RAB3GAP1Q15042 981 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 SGMS1Q86VZ5 419 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 ANKRD13AQ8IZ07 590 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 ACER1Q8TDN7 264 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 TMEM47Q9BQJ4 181 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 CLIP2Q9UDT6 1046 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 BRPF3Q9ULD4 1205 aa11.76□□□□□ -0.53
COL8A1-206ENST00000474648 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 TTLL1O95922 423 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 TOP1P11387 765 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms