RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 EMILIN3Q9NT22 766 aa17.09■□□□□ 0.33
CCDC78-209ENST00000474647 DBNLQ9UJU6 430 aaKnown RBP17.09■□□□□ 0.33
CCDC78-209ENST00000474647 NDUFB9Q9Y6M9 179 aa17.09■□□□□ 0.33
CCDC78-209ENST00000474647 ZNF236Q9UL36 1845 aa17.09■□□□□ 0.33
CCDC78-209ENST00000474647 DLL1O00548 723 aa17.08■□□□□ 0.32
CCDC78-209ENST00000474647 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.32
CCDC78-209ENST00000474647 TDHQ8IZJ6 230 aa17.08■□□□□ 0.32
CCDC78-209ENST00000474647 DEFB123Q8N688 67 aa17.08■□□□□ 0.32
CCDC78-209ENST00000474647 MAGEB6Q8N7X4 407 aa17.08■□□□□ 0.32
CCDC78-209ENST00000474647 UBE2OQ9C0C9 1292 aaKnown RBP17.08■□□□□ 0.32
CCDC78-209ENST00000474647 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
CCDC78-209ENST00000474647 MORN1Q5T089 497 aa17.07■□□□□ 0.32
CCDC78-209ENST00000474647 Q7L0L9 218 aa17.07■□□□□ 0.32
CCDC78-209ENST00000474647 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
CCDC78-209ENST00000474647 ZNF512BQ96KM6 892 aaPredicted RBP17.07■□□□□ 0.32
CCDC78-209ENST00000474647 SERPINB13Q9UIV8 391 aa17.07■□□□□ 0.32
CCDC78-209ENST00000474647 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
CCDC78-209ENST00000474647 CCNA1P78396 465 aa17.06■□□□□ 0.32
CCDC78-209ENST00000474647 POTEEQ6S8J3 1075 aa17.06■□□□□ 0.32
CCDC78-209ENST00000474647 ITPRIPQ8IWB1 547 aa17.06■□□□□ 0.32
CCDC78-209ENST00000474647 USP6NLQ92738 828 aa17.06■□□□□ 0.32
CCDC78-209ENST00000474647 EYSQ5T1H1 3165 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L15C9J2P7 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L13C9JLJ4 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L11C9JVI0 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L18D6R9N7 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L22D6RA61 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L17D6RBQ6 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L19D6RCP7 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L20D6RJB6 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 GLRX3O76003 335 aaKnown RBP17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP14P54578 494 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 MDM2Q00987 491 aaPredicted RBP17.05■□□□□ 0.32
CCDC78-209ENST00000474647 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 MAP2K5Q13163 448 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 LRRC26Q2I0M4 334 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 ABCB5Q2M3G0 1257 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 CERKLQ49MI3 558 aaPredicted RBP17.05■□□□□ 0.32
CCDC78-209ENST00000474647 RABGAP1Q9Y3P9 1069 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 IVNS1ABPQ9Y6Y0 642 aa17.05■□□□□ 0.32
CCDC78-209ENST00000474647 SMCHD1A6NHR9 2005 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 IGSF3O75054 1194 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 CNMDO75829 334 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 COL6A1P12109 1028 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 VCAM1P19320 739 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 CNGA1P29973 690 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 LRIT3Q3SXY7 679 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 MFSD14CQ5VZR4 134 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 LHX8Q68G74 356 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 CERS3Q8IU89 383 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 EAF2Q96CJ1 260 aaPredicted RBP17.04■□□□□ 0.32
CCDC78-209ENST00000474647 EDC3Q96F86 508 aaKnown RBP17.04■□□□□ 0.32
CCDC78-209ENST00000474647 C12orf42Q96LP6 360 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 ANTXR1Q9H6X2 564 aa17.04■□□□□ 0.32
CCDC78-209ENST00000474647 MAP3K12Q12852 859 aa17.03■□□□□ 0.32
CCDC78-209ENST00000474647 GPR153Q6NV75 609 aa17.03■□□□□ 0.32
CCDC78-209ENST00000474647 CATSPERGQ6ZRH7 1159 aa17.03■□□□□ 0.32
CCDC78-209ENST00000474647 TTC6Q86TZ1 520 aa17.03■□□□□ 0.32
CCDC78-209ENST00000474647 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
CCDC78-209ENST00000474647 EHD4Q9H223 541 aa17.03■□□□□ 0.32
CCDC78-209ENST00000474647 CABP5Q9NP86 173 aa17.03■□□□□ 0.32
CCDC78-209ENST00000474647 FLRT1Q9NZU1 646 aa17.03■□□□□ 0.32
CCDC78-209ENST00000474647 MIER1Q8N108 512 aa17.02■□□□□ 0.32
CCDC78-209ENST00000474647 SENP6Q9GZR1 1112 aaPredicted RBP17.02■□□□□ 0.32
CCDC78-209ENST00000474647 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.32
CCDC78-209ENST00000474647 RPAP3Q9H6T3 665 aaPredicted RBP17.02■□□□□ 0.32
CCDC78-209ENST00000474647 NOP58Q9Y2X3 529 aaKnown RBP17.02■□□□□ 0.32
CCDC78-209ENST00000474647 CUL9Q8IWT3 2517 aa17.02■□□□□ 0.31
CCDC78-209ENST00000474647 SLC15A5A6NIM6 579 aa17.01■□□□□ 0.31
CCDC78-209ENST00000474647 MPHOSPH10O00566 681 aaKnown RBP17.01■□□□□ 0.31
CCDC78-209ENST00000474647 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
CCDC78-209ENST00000474647 PTPREP23469 700 aa17.01■□□□□ 0.31
CCDC78-209ENST00000474647 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
CCDC78-209ENST00000474647 AACSQ86V21 672 aa17.01■□□□□ 0.31
CCDC78-209ENST00000474647 BTBD7Q9P203 1132 aa17.01■□□□□ 0.31
CCDC78-209ENST00000474647 DDX20Q9UHI6 824 aaKnown RBP17.01■□□□□ 0.31
CCDC78-209ENST00000474647 EXOC6BQ9Y2D4 811 aa17.01■□□□□ 0.31
CCDC78-209ENST00000474647 MYH4Q9Y623 1939 aa17.01■□□□□ 0.31
CCDC78-209ENST00000474647 SPDYE16A6NNV3 312 aaPredicted RBP17■□□□□ 0.31
CCDC78-209ENST00000474647 RLBP1P12271 317 aa17■□□□□ 0.31
CCDC78-209ENST00000474647 SHMT1P34896 483 aa17■□□□□ 0.31
CCDC78-209ENST00000474647 PLCD1P51178 756 aa17■□□□□ 0.31
CCDC78-209ENST00000474647 ATN1P54259 1190 aaPredicted RBP17■□□□□ 0.31
CCDC78-209ENST00000474647 NPLOC4Q8TAT6 608 aa17■□□□□ 0.31
CCDC78-209ENST00000474647 MAGEB6P1A0A0J9YX57 407 aa16.99■□□□□ 0.31
CCDC78-209ENST00000474647 CYP2C19P33261 490 aa16.99■□□□□ 0.31
CCDC78-209ENST00000474647 GRB14Q14449 540 aa16.99■□□□□ 0.31
CCDC78-209ENST00000474647 SEPT2Q15019 361 aa16.99■□□□□ 0.31
CCDC78-209ENST00000474647 LBHD1Q9BQE6 289 aaPredicted RBP16.99■□□□□ 0.31
CCDC78-209ENST00000474647 RIOK1Q9BRS2 568 aaKnown RBP16.99■□□□□ 0.31
CCDC78-209ENST00000474647 TANGO6Q9C0B7 1094 aa16.99■□□□□ 0.31
CCDC78-209ENST00000474647 BCL11AQ9H165 835 aa16.99■□□□□ 0.31
CCDC78-209ENST00000474647 MTMR10Q9NXD2 777 aa16.99■□□□□ 0.31
CCDC78-209ENST00000474647 STXBP5LQ9Y2K9 1186 aa16.99■□□□□ 0.31
CCDC78-209ENST00000474647 MSCO60682 206 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 GUCY1A2P33402 732 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 EVX2Q03828 476 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 CEP85Q6P2H3 762 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 LBX2Q6XYB7 198 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms