RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 LLPHQ9BRT6 129 aaKnown RBP16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 WDR33Q9C0J8 1336 aaKnown RBP16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 PHF20L1A8MW92 1017 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 PRC1O43663 620 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 CDKL5O76039 1030 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 CPA1P15085 419 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 INPP5BP32019 993 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 CYB5R4Q7L1T6 521 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 IQCA1Q86XH1 822 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 NKX2-3Q8TAU0 364 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 ZNF274Q96GC6 653 aaPredicted RBP16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 CCDC17Q96LX7 622 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 ZKSCAN3Q9BRR0 538 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 UBAC1Q9BSL1 405 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 ANP32EQ9BTT0 268 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 CABP5Q9NP86 173 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 ZSWIM5Q9P217 1185 aa16.03■□□□□ 0.16
LDLRAP1-204ENST00000474283 DDX11L8A8MPP1 907 aa16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 GH2P01242 217 aa16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 CAP2P40123 477 aa16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 COL9A3Q14050 684 aaPredicted RBP16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 RAB3GAP1Q15042 981 aa16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 MB21D2Q8IYB1 491 aaPredicted RBP16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 C2orf69Q8N8R5 385 aa16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 ZKSCAN4Q969J2 545 aaPredicted RBP16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 KLRG1Q96E93 195 aa16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 TCEANC2Q96MN5 208 aa16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 AGXT2Q9BYV1 514 aa16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 GBA2Q9HCG7 927 aaPredicted RBP16.02■□□□□ 0.16
LDLRAP1-204ENST00000474283 MYH6P13533 1939 aa16.02■□□□□ 0.15
LDLRAP1-204ENST00000474283 UBE2Q2LH0YL09 131 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 CTNND1O60716 968 aaKnown RBP16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 RCAN1P53805 252 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 EXOSC10Q01780 885 aaKnown RBP16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 FSTL1Q12841 308 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 BRF1Q92994 677 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 LRRC2Q9BYS8 371 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 PICK1Q9NRD5 415 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 ZNF112Q9UJU3 913 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 ZBTB21Q9ULJ3 1066 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 CSADQ9Y600 493 aa16.01■□□□□ 0.15
LDLRAP1-204ENST00000474283 PASKQ96RG2 1323 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 NMT2O60551 498 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 ASNSP08243 561 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 DDIT3P35638 169 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 LIFRP42702 1097 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 JAG1P78504 1218 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 MAP3K9P80192 1104 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 ATP2B2Q01814 1243 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 SEPT2Q15019 361 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 CST9Q5W186 159 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 SCYL3Q8IZE3 742 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 NEDD1Q8NHV4 660 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 FRMD4AQ9P2Q2 1039 aaPredicted RBP16■□□□□ 0.15
LDLRAP1-204ENST00000474283 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
LDLRAP1-204ENST00000474283 CCDC196A0A1B0GTZ2 297 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 CCDC69A6NI79 296 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 CPLX1O14810 134 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 IFIT3O14879 490 aaKnown RBP15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 EVCP57679 992 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 ANTXR2P58335 489 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 VGLL4Q14135 290 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 NFXL1Q6ZNB6 911 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 CLEC10AQ8IUN9 316 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 ANKRD13AQ8IZ07 590 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 GTF3C6Q969F1 213 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 CEP95Q96GE4 821 aa15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 NAP1L2Q9ULW6 460 aaPredicted RBP15.99■□□□□ 0.15
LDLRAP1-204ENST00000474283 TNKSO95271 1327 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 PFKFB2O60825 505 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 CALM1P0DP23 149 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 CALM2P0DP24 149 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 CALM3P0DP25 149 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 FKBP1BP68106 108 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 TOB2Q14106 344 aaPredicted RBP15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 MAP3K11Q16584 847 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 CSPP1Q1MSJ5 1256 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 TMEM67Q5HYA8 995 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 CCDC84Q86UT8 332 aaPredicted RBP15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 CCDC83Q8IWF9 413 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 FAM184AQ8NB25 1140 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 CLMNQ96JQ2 1002 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 ZSCAN10Q96SZ4 725 aaPredicted RBP15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 ELP3Q9H9T3 547 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 IL17RBQ9NRM6 502 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 TPCN1Q9ULQ1 816 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 STX8Q9UNK0 236 aa15.98■□□□□ 0.15
LDLRAP1-204ENST00000474283 GUCY1A2P33402 732 aa15.97■□□□□ 0.15
LDLRAP1-204ENST00000474283 ICA1Q05084 483 aa15.97■□□□□ 0.15
LDLRAP1-204ENST00000474283 WTAPQ15007 396 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms