RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 ZYXQ15942 572 aaKnown RBP19.05■□□□□ 0.64
CDPF1-205ENST00000474256 ZSCAN25Q6NSZ9 544 aa19.05■□□□□ 0.64
CDPF1-205ENST00000474256 SWAP70Q9UH65 585 aa19.05■□□□□ 0.64
CDPF1-205ENST00000474256 PCDHB15Q9Y5E8 787 aa19.05■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L15C9J2P7 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L13C9JLJ4 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L11C9JVI0 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L18D6R9N7 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L22D6RA61 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L17D6RBQ6 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L19D6RCP7 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L20D6RJB6 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 VCAM1P19320 739 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 USP17L24Q0WX57 530 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 Q3C1V9 767 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 CATSPERGQ6ZRH7 1159 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 UBE2Q1Q7Z7E8 422 aa19.04■□□□□ 0.64
CDPF1-205ENST00000474256 U2AF1L4Q8WU68 220 aaKnown RBP19.04■□□□□ 0.64
CDPF1-205ENST00000474256 PUS7LQ9H0K6 701 aaKnown RBP19.04■□□□□ 0.64
CDPF1-205ENST00000474256 SGPL1O95470 568 aa19.03■□□□□ 0.64
CDPF1-205ENST00000474256 ERVK-9P63128 1117 aa19.03■□□□□ 0.64
CDPF1-205ENST00000474256 ERVK-24P63145 666 aa19.03■□□□□ 0.64
CDPF1-205ENST00000474256 SLC44A5Q8NCS7 719 aa19.03■□□□□ 0.64
CDPF1-205ENST00000474256 DYNLL2Q96FJ2 89 aa19.03■□□□□ 0.64
CDPF1-205ENST00000474256 PAK6Q9NQU5 681 aaPredicted RBP19.03■□□□□ 0.64
CDPF1-205ENST00000474256 A0A1W2PRG0 241 aa19.02■□□□□ 0.64
CDPF1-205ENST00000474256 MPHOSPH10O00566 681 aaKnown RBP19.02■□□□□ 0.64
CDPF1-205ENST00000474256 MAPK4P31152 587 aa19.02■□□□□ 0.64
CDPF1-205ENST00000474256 RRP1P56182 461 aaKnown RBP19.02■□□□□ 0.64
CDPF1-205ENST00000474256 C12orf60Q5U649 245 aa19.02■□□□□ 0.64
CDPF1-205ENST00000474256 KBTBD3Q8NAB2 608 aa19.02■□□□□ 0.64
CDPF1-205ENST00000474256 GPATCH3Q96I76 525 aa19.02■□□□□ 0.64
CDPF1-205ENST00000474256 SLC4A4Q9Y6R1 1079 aa19.02■□□□□ 0.64
CDPF1-205ENST00000474256 NAV1Q8NEY1 1877 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 USP17L12C9JPN9 530 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 USP17L21D6R901 530 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 SMIM22K7EJ46 135 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 CNMDO75829 334 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 HMGCRP04035 888 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 CAPN2P17655 700 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 TSHZ3Q63HK5 1081 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 LBX2Q6XYB7 198 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 TMEM179Q6ZVK1 233 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 PAGR1Q9BTK6 254 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 PORCNQ9H237 461 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 RABGAP1Q9Y3P9 1069 aa19.01■□□□□ 0.63
CDPF1-205ENST00000474256 CYP2D7A0A087X1C5 515 aa19■□□□□ 0.63
CDPF1-205ENST00000474256 SOCS4Q8WXH5 440 aa19■□□□□ 0.63
CDPF1-205ENST00000474256 GCC1Q96CN9 775 aa19■□□□□ 0.63
CDPF1-205ENST00000474256 DDRGK1Q96HY6 314 aa19■□□□□ 0.63
CDPF1-205ENST00000474256 DEFB118Q96PH6 123 aa19■□□□□ 0.63
CDPF1-205ENST00000474256 STRBPQ96SI9 672 aaKnown RBP19■□□□□ 0.63
CDPF1-205ENST00000474256 NUDT12Q9BQG2 462 aa19■□□□□ 0.63
CDPF1-205ENST00000474256 RPAP3Q9H6T3 665 aaPredicted RBP19■□□□□ 0.63
CDPF1-205ENST00000474256 XRCC5P13010 732 aaKnown RBP18.99■□□□□ 0.63
CDPF1-205ENST00000474256 AKR1B1P15121 316 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 CDK8P49336 464 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 CTR9Q6PD62 1173 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 C16orf86Q6ZW13 317 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 GPR142Q7Z601 462 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 SIAH1Q8IUQ4 282 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 AMOTL1Q8IY63 956 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 USP6NLQ92738 828 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 CCDC17Q96LX7 622 aa18.99■□□□□ 0.63
CDPF1-205ENST00000474256 SPDYE16A6NNV3 312 aaPredicted RBP18.98■□□□□ 0.63
CDPF1-205ENST00000474256 CYP2B6P20813 491 aa18.98■□□□□ 0.63
CDPF1-205ENST00000474256 TRIM32Q13049 653 aa18.98■□□□□ 0.63
CDPF1-205ENST00000474256 MORN1Q5T089 497 aa18.98■□□□□ 0.63
CDPF1-205ENST00000474256 TRIB2Q92519 343 aa18.98■□□□□ 0.63
CDPF1-205ENST00000474256 APPBP2Q92624 585 aa18.98■□□□□ 0.63
CDPF1-205ENST00000474256 OSBP2Q969R2 916 aa18.98■□□□□ 0.63
CDPF1-205ENST00000474256 CRISPLD2Q9H0B8 497 aa18.98■□□□□ 0.63
CDPF1-205ENST00000474256 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.98■□□□□ 0.63
CDPF1-205ENST00000474256 TTC41PQ6P2S7 1318 aa18.98■□□□□ 0.63
CDPF1-205ENST00000474256 DOCK3Q8IZD9 2030 aa18.97■□□□□ 0.63
CDPF1-205ENST00000474256 RNF113AO15541 343 aaKnown RBP18.97■□□□□ 0.63
CDPF1-205ENST00000474256 FARP2O94887 1054 aaPredicted RBP18.97■□□□□ 0.63
CDPF1-205ENST00000474256 TFRCP02786 760 aaKnown RBP18.97■□□□□ 0.63
CDPF1-205ENST00000474256 ZFYP08048 801 aaPredicted RBP18.97■□□□□ 0.63
CDPF1-205ENST00000474256 CCNA1P78396 465 aa18.97■□□□□ 0.63
CDPF1-205ENST00000474256 PLEKHH3Q7Z736 793 aa18.97■□□□□ 0.63
CDPF1-205ENST00000474256 CCAR1Q8IX12 1150 aaKnown RBP18.97■□□□□ 0.63
CDPF1-205ENST00000474256 BTBD7Q9P203 1132 aa18.97■□□□□ 0.63
CDPF1-205ENST00000474256 ARPP21Q9UBL0 812 aaPredicted RBP18.97■□□□□ 0.63
CDPF1-205ENST00000474256 TMX2Q9Y320 296 aa18.97■□□□□ 0.63
CDPF1-205ENST00000474256 RPTORQ8N122 1335 aa18.97■□□□□ 0.63
CDPF1-205ENST00000474256 GSG1L2A8MUP6 293 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 ICA1Q05084 483 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 COG2Q14746 738 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 SBK1Q52WX2 424 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 KIAA1755Q5JYT7 1200 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 MAP3K21Q5TCX8 1036 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 GIMAP6Q6P9H5 292 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 CLEC10AQ8IUN9 316 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 TRMT44Q8IYL2 757 aaKnown RBP18.96■□□□□ 0.63
CDPF1-205ENST00000474256 PI4K2BQ8TCG2 481 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 LPAR1Q92633 364 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 ARHGEF10LQ9HCE6 1279 aa18.96■□□□□ 0.63
CDPF1-205ENST00000474256 HMX1Q9NP08 348 aaPredicted RBP18.96■□□□□ 0.63
CDPF1-205ENST00000474256 ERC2O15083 957 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms