RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 NRXN1Q9ULB1 1477 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 ANKRD18BA2A2Z9 1011 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 SMTNL1A8MU46 457 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 BOLA2-SMG1P6H3BVE0 249 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 hCG_1984214I3L0E3 225 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 PPFIA2O75334 1257 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 CD46P15529 392 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 RASA1P20936 1047 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 ENPP1P22413 925 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 IL4RP24394 825 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 WASHC4Q2M389 1173 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 MYSM1Q5VVJ2 828 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 PPP4R3AQ6IN85 833 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 ZNF449Q6P9G9 518 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 C16orf54Q6UWD8 224 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 KSR2Q6VAB6 950 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 IFNL2Q8IZJ0 200 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 PGBD3Q8N328 593 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 FLCNQ8NFG4 579 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 RMDN2Q96LZ7 410 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 SLC4A5Q9BY07 1137 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 IQCGQ9H095 443 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 RRP15Q9Y3B9 282 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 DDX49Q9Y6V7 483 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 ECEL1O95672 775 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 VCAM1P19320 739 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 NDUFV2P19404 249 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 MAPK1P28482 360 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 CLK2P49760 499 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 EPHB1P54762 984 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 SARNPP82979 210 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 COL9A2Q14055 689 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 BRDTQ58F21 947 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 FAM83BQ5T0W9 1011 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 MCF2L2Q86YR7 1114 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 SULF1Q8IWU6 871 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 SH3TC2Q8TF17 1288 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 RPAP3Q9H6T3 665 aaPredicted RBP7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 MKS1Q9NXB0 559 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 TBK1Q9UHD2 729 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 PCSK1NQ9UHG2 260 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 PRR36Q9H6K5 1346 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 FMN2Q9NZ56 1722 aa7.05□□□□□ -1.28
SMARCE1-208ENST00000474246 H0Y3Z8 333 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 KRT37O76014 449 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 GYS1P13807 737 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 HMGB2P26583 209 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 PDE1CQ14123 709 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 PUM3Q15397 648 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 AKAP4Q5JQC9 854 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 INTS3Q68E01 1043 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 CDC37L1Q7L3B6 337 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 MCM10Q7L590 875 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 KIAA0825Q8IV33 1275 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 SPICE1Q8N0Z3 855 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 TEX9Q8N6V9 391 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 NKAIN3Q8N8D7 197 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 ANKRD42Q8N9B4 389 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 GAS2L2Q8NHY3 880 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 UHMK1Q8TAS1 419 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 NEK9Q8TD19 979 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 ZBTB10Q96DT7 871 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 GSDMAQ96QA5 445 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 KIF2CQ99661 725 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 MTMR10Q9NXD2 777 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 SAGE1Q9NXZ1 904 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 C6orf203Q9P0P8 240 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 INPP5FQ9Y2H2 1132 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 ANKRD30BQ9BXX2 1392 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 TMCO5BA8MYB1 307 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 CDC45O75419 566 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 SESN3P58005 492 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 CCBE1Q6UXH8 406 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 C14orf80Q86SX3 495 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 FLAD1Q8NFF5 587 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 SPIRE2Q8WWL2 714 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 NUDT16Q96DE0 195 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 ALG2Q9H553 416 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 TMOD4Q9NZQ9 345 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 TPCN1Q9ULQ1 816 aa7.04□□□□□ -1.28
SMARCE1-208ENST00000474246 RNF40O75150 1001 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 E2F6O75461 281 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ALDH1L1O75891 902 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ITGBL1O95965 494 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 UBXN2AP68543 259 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 GRM1Q13255 1194 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 LRRC41Q15345 812 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ANO1Q5XXA6 986 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ZSCAN29Q8IWY8 852 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 MYOCDQ8IZQ8 938 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 OR8H2Q8N162 312 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ZNF713Q8N859 430 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ARL10Q8N8L6 244 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 SH3KBP1Q96B97 665 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ZMAT5Q9UDW3 170 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 RPTORQ8N122 1335 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 POTECB2RU33 542 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ZNF76P36508 570 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 UBA7P41226 1012 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms