RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 IRF5Q13568 498 aa24.53■■□□□ 1.52
SNX13-206ENST00000474067 GPRC5AQ8NFJ5 357 aa24.53■■□□□ 1.52
SNX13-206ENST00000474067 NKX2-3Q8TAU0 364 aa24.53■■□□□ 1.52
SNX13-206ENST00000474067 PI4K2BQ8TCG2 481 aa24.53■■□□□ 1.52
SNX13-206ENST00000474067 PXYLP1Q8TE99 480 aa24.53■■□□□ 1.52
SNX13-206ENST00000474067 STRBPQ96SI9 672 aaKnown RBP24.53■■□□□ 1.52
SNX13-206ENST00000474067 MORF4L1Q9UBU8 362 aa24.53■■□□□ 1.52
SNX13-206ENST00000474067 BIN2Q9UBW5 565 aaPredicted RBP24.53■■□□□ 1.52
SNX13-206ENST00000474067 MGAMO43451 1857 aa24.53■■□□□ 1.52
SNX13-206ENST00000474067 PRKAB2O43741 272 aa24.52■■□□□ 1.52
SNX13-206ENST00000474067 CCNA1P78396 465 aa24.52■■□□□ 1.52
SNX13-206ENST00000474067 JAG1P78504 1218 aa24.52■■□□□ 1.52
SNX13-206ENST00000474067 SBK1Q52WX2 424 aa24.52■■□□□ 1.52
SNX13-206ENST00000474067 C16orf86Q6ZW13 317 aa24.52■■□□□ 1.52
SNX13-206ENST00000474067 MYH8P13535 1937 aa24.52■■□□□ 1.52
SNX13-206ENST00000474067 CAP1Q01518 475 aa24.51■■□□□ 1.51
SNX13-206ENST00000474067 PRKCZQ05513 592 aa24.51■■□□□ 1.51
SNX13-206ENST00000474067 TSHZ3Q63HK5 1081 aa24.51■■□□□ 1.51
SNX13-206ENST00000474067 LPAR1Q92633 364 aa24.51■■□□□ 1.51
SNX13-206ENST00000474067 EVI5LQ96CN4 794 aa24.51■■□□□ 1.51
SNX13-206ENST00000474067 EMILIN3Q9NT22 766 aa24.51■■□□□ 1.51
SNX13-206ENST00000474067 GPAA1O43292 621 aa24.5■■□□□ 1.51
SNX13-206ENST00000474067 ECM2O94769 699 aaPredicted RBP24.5■■□□□ 1.51
SNX13-206ENST00000474067 APPP05067 770 aa24.5■■□□□ 1.51
SNX13-206ENST00000474067 SLC3A2P08195 630 aaKnown RBP24.5■■□□□ 1.51
SNX13-206ENST00000474067 MAPK4P31152 587 aa24.5■■□□□ 1.51
SNX13-206ENST00000474067 TDO2P48775 406 aa24.5■■□□□ 1.51
SNX13-206ENST00000474067 SEPT2Q15019 361 aa24.5■■□□□ 1.51
SNX13-206ENST00000474067 ZYXQ15942 572 aaKnown RBP24.5■■□□□ 1.51
SNX13-206ENST00000474067 CTR9Q6PD62 1173 aa24.5■■□□□ 1.51
SNX13-206ENST00000474067 CWC22Q9HCG8 908 aaKnown RBP24.5■■□□□ 1.51
SNX13-206ENST00000474067 STAP2Q9UGK3 403 aa24.5■■□□□ 1.51
SNX13-206ENST00000474067 CTGFP29279 349 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 CDK8P49336 464 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 FLT3LGP49771 235 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 ICA1Q05084 483 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 SH3TC2Q8TF17 1288 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 SOCS4Q8WXH5 440 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 OSBP2Q969R2 916 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 KANSL2Q9H9L4 492 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 MKNK2Q9HBH9 465 aa24.49■■□□□ 1.51
SNX13-206ENST00000474067 PATL2C9JE40 543 aaKnown RBP24.48■■□□□ 1.51
SNX13-206ENST00000474067 CYP2D6P10635 497 aa24.48■■□□□ 1.51
SNX13-206ENST00000474067 VCAM1P19320 739 aa24.48■■□□□ 1.51
SNX13-206ENST00000474067 SLFNL1Q499Z3 407 aa24.48■■□□□ 1.51
SNX13-206ENST00000474067 P2RX7Q99572 595 aaKnown RBP24.48■■□□□ 1.51
SNX13-206ENST00000474067 BAZ2AQ9UIF9 1905 aaKnown RBP24.48■■□□□ 1.51
SNX13-206ENST00000474067 RABGAP1Q9Y3P9 1069 aa24.48■■□□□ 1.51
SNX13-206ENST00000474067 ADCY3O60266 1144 aa24.47■■□□□ 1.51
SNX13-206ENST00000474067 SHROOM1Q2M3G4 852 aaPredicted RBP24.47■■□□□ 1.51
SNX13-206ENST00000474067 CATSPERGQ6ZRH7 1159 aa24.47■■□□□ 1.51
SNX13-206ENST00000474067 SMC5Q8IY18 1101 aa24.47■■□□□ 1.51
SNX13-206ENST00000474067 TRMT44Q8IYL2 757 aaKnown RBP24.47■■□□□ 1.51
SNX13-206ENST00000474067 HOXC10Q9NYD6 342 aa24.47■■□□□ 1.51
SNX13-206ENST00000474067 ZSWIM8A7E2V4 1837 aa24.47■■□□□ 1.51
SNX13-206ENST00000474067 SALL3Q9BXA9 1300 aa24.46■■□□□ 1.51
SNX13-206ENST00000474067 GSG1L2A8MUP6 293 aa24.46■■□□□ 1.51
SNX13-206ENST00000474067 PDE1AP54750 535 aa24.46■■□□□ 1.51
SNX13-206ENST00000474067 ERVK-9P63128 1117 aa24.46■■□□□ 1.51
SNX13-206ENST00000474067 ERVK-24P63145 666 aa24.46■■□□□ 1.51
SNX13-206ENST00000474067 LBX2Q6XYB7 198 aa24.46■■□□□ 1.51
SNX13-206ENST00000474067 DYNLL2Q96FJ2 89 aa24.46■■□□□ 1.51
SNX13-206ENST00000474067 ROBO3Q96MS0 1386 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 MINDY4BA8MYZ0 360 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 GUCY1A2P33402 732 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 PPP4R3BQ5MIZ7 849 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 ZMYM1Q5SVZ6 1142 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 SLC44A5Q8NCS7 719 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 ACER1Q8TDN7 264 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 NUDT12Q9BQG2 462 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 NAPBQ9H115 298 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 RPAP3Q9H6T3 665 aaPredicted RBP24.45■■□□□ 1.5
SNX13-206ENST00000474067 GOPCQ9HD26 462 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 TMX2Q9Y320 296 aa24.45■■□□□ 1.5
SNX13-206ENST00000474067 PDE4BQ07343 736 aa24.44■■□□□ 1.5
SNX13-206ENST00000474067 COG2Q14746 738 aa24.44■■□□□ 1.5
SNX13-206ENST00000474067 ZNF444Q8N0Y2 327 aaPredicted RBP24.44■■□□□ 1.5
SNX13-206ENST00000474067 MB21D1Q8N884 522 aa24.44■■□□□ 1.5
SNX13-206ENST00000474067 OTUD7AQ8TE49 926 aaPredicted RBP24.44■■□□□ 1.5
SNX13-206ENST00000474067 PAGR1Q9BTK6 254 aa24.44■■□□□ 1.5
SNX13-206ENST00000474067 GABRQQ9UN88 632 aa24.44■■□□□ 1.5
SNX13-206ENST00000474067 POTEFA5A3E0 1075 aa24.43■■□□□ 1.5
SNX13-206ENST00000474067 AKR1B1P15121 316 aa24.43■■□□□ 1.5
SNX13-206ENST00000474067 IFNL3Q8IZI9 196 aa24.43■■□□□ 1.5
SNX13-206ENST00000474067 TANGO6Q9C0B7 1094 aa24.43■■□□□ 1.5
SNX13-206ENST00000474067 SUPT16HQ9Y5B9 1047 aaKnown RBP24.43■■□□□ 1.5
SNX13-206ENST00000474067 WDR46O15213 610 aaKnown RBP24.42■■□□□ 1.5
SNX13-206ENST00000474067 CHGBP05060 677 aa24.42■■□□□ 1.5
SNX13-206ENST00000474067 CHD1LQ86WJ1 897 aa24.42■■□□□ 1.5
SNX13-206ENST00000474067 LNPKQ9C0E8 428 aa24.42■■□□□ 1.5
SNX13-206ENST00000474067 RNF208Q9H0X6 261 aa24.42■■□□□ 1.5
SNX13-206ENST00000474067 VCPKMTQ9H867 229 aa24.42■■□□□ 1.5
SNX13-206ENST00000474067 HELLSQ9NRZ9 838 aa24.42■■□□□ 1.5
SNX13-206ENST00000474067 RBPJLQ9UBG7 517 aa24.42■■□□□ 1.5
SNX13-206ENST00000474067 IVNS1ABPQ9Y6Y0 642 aa24.42■■□□□ 1.5
SNX13-206ENST00000474067 CYP2D7A0A087X1C5 515 aa24.41■■□□□ 1.5
SNX13-206ENST00000474067 M0R2C6 588 aa24.41■■□□□ 1.5
SNX13-206ENST00000474067 HMGCRP04035 888 aa24.41■■□□□ 1.5
SNX13-206ENST00000474067 GJB1P08034 283 aa24.41■■□□□ 1.5
SNX13-206ENST00000474067 XRCC5P13010 732 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms